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Information for unigene UN11058

FASTA Sequence
Unigene ID: UN11058Length: 815 SSR 
CTTCCTTTCCCTTCCTCCTTCCATATCCCTCCTTTCCTCTTCTCTCTCTCTCTCTCTCTCTCTGTTTACGCCTCATTCCTTATTAA
TCTTTGTCTCTCTTGGTTGGATTCCTAGGGTTTTCTCCGGCGCTCAGATCTCCCCCGTTCTAACTCTTTAGATCCAGATTCTCCTC
CTTTTTTATGTAGGTAAAACACACATATCAAGTGCTAGAGTCAAGATCACAAAAAGTTGTATTGAGGTGATCTGGGCTGGGCTGCT
CTTTTACTGACTCTCCTCTTTTTTATAAGCTGTGAGCTATGAGTTGTTGCTAATCTTTAAAAAACAATATTGGTTATGGAGAGAAG
GCACATCTACTGCAGCTGCTGCATCCATGCTGGTAGAAAGCATGCGTGGATACTGTCTTTTGGGTGATGCCCTTGACAAAATTAGT
TCCCGATGCATTCGGCGTCCTCACCATCTTTTTAGTCGCTCTGCTTATTCTTCTCGGTCTCCTCTGCATCGCCTACTCCTTCTACT
TCCATTCTCACGCTCGTAAGCAAGGCTTTATTCAGCTTGGCTACTTCACCGGTCCTTGGATTATCCGCATCACTTTCATTCTCTTC
TCCTTCTGGTGGGCTGTTGGTGAGATCTTCCGGCTGAGTTTGTTTAGGCGTCACACTATGTTGCTCAGCGGCTTGGATCTCAGATG
GCAAGAAAACGTCTGCAAGTGGTACATTGTTTCCATTCTTGGGTTTGCCGAGCCTTGCCTCTTTCTCACACTCATGTTTCTTCTGC
GAGCTCCTTTGAAGATCGACTCTGGGGCTTTGAGTGGCAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176081 uncharacterized protein [Arabidopsis thaliana]6401e-064
XP_002894681 hypothetical protein ARALYDRAFT_474854 [Arabidopsis lyrata subsp. lyrata]6401e-064
XP_002528841 conserved hypothetical protein [Ricinus communis]4965e-048
XP_002265141 PREDICTED: hypothetical protein [Vitis vinifera]4813e-046
XP_002331087 predicted protein [Populus trichocarpa]4804e-046

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FVT5 Putative uncharacterized protein At1g576806407e-065
B9SS72 Putative uncharacterized protein4964e-048
B9N7A2 Predicted protein (Fragment)4803e-046
B9N0G4 Predicted protein4597e-044
Q1SKU3 Putative uncharacterized protein4508e-043

Arabidopsis top hits (Blast detail)Scoree value
AT1G57680.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).6404e-067
AT1G57680.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).6404e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information