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Information for unigene UN11060
| FASTA Sequence |
| Unigene ID: UN11060 | Length: 1756 |
SSR | | ACAACGCTTTTGATTCTTCGCCGACAAACAAAAAAAAGAGAAAAAAGAACCCTGTAAACCACCGGTTCGTCGGAACTCAATGCCGG
AGAATTCTTCGTCGGTAGACTGCGCCATGGAGAAGGCATCAGGCCCACACTTCTCCGGCCTCCGCTTCGACGGCCTTCTCTCTTCT
TCTTCTTCTCCACCCAATTCCTCCGTCCCTTCTCTGTCTCACCTCCTTTCTGCTGTCCCTTCCTCTTCTTCTTCTTCTCCTGACGC
TCCCAAACAGCCCTTCGTTATCGGGGTATCTGGTGGTACGGCATCTGGTAAGACAACAGTGTGCGACCTGATTATCCAGCAACTTC
ATGACCATCGTGTTGTTCTAATTAACCAGGATTCGTTTTACCGTGTTTTAACAACTGAAGAGCTGCAGCGTGTGCACGAGTACAAC
TTTGATCATCCTGATGCGTTTGACACGGAGCAGCTTTTGCATTGTGCTGAGACTCTCAAGAGCGGCCAACCTTATCAAGTTCCCAT
CTACGACTTTAAGACCCATCAGCGTAGATCTGACTCTTTCCGCCAGGTGAATGCTTCTGATGTTATAATTTTGGAAGGGATTCTTG
TTTTCCATGACTCCCGAGTTCGCAATCTTATGAACATGAAGATCTTCGTTGACACAGATACTGATGTGAGGCTTGCTCGCAGACTC
AGGCGTGACTTAGTTGAGAGGGGCAGGGATGCCGAATCTGTCCTCGACCAGTATGCAAAGTTCGTGAAACCGGCGTTTGATGACTT
TGTCCTTCCCTTTAAGAAATATGCTGACGTGATCATTCCTCGAGGAGGTGACAATCACGTCGCTGTTGATTTGATTACCCAACACA
TCCACACAAAACTCGGGCAGCATGATCTCTGCAAAATCTACCCAAATGTTTATGTCATCCAATCAACATTTCAGATAAGAGGCATG
CATACACTTATCAGGGAGAAGGACATATCAAAGCATGATTTTGTGTTTTATTCAGACCGACTCATTCGTCTGGTGGTGGAGCATGG
TCTTGGTCATTTGCCCTTCACTGAGAAACAAGTAGTTACTCCAACAGGATCTGTGTACACTGGAGTTGATTTCTGCAAGAAACTTT
GTGGGATCTCTATTATTCGAAGTGGTGAAAGCATGGAAAATGCATTACGCGCTTGCTGCAAAGGGATTAAGTTAGGGAAGATTCTT
ATTCATCGTGATGGAGACGATGGAAAACAGCTTATATATGAGAAGCTTCCTCGCGACATCTCTGAACGCCATGTCTTGCTTCTAGA
CCCTGTCTTAGCTACAGGTAACTCTGCTAATCAAGCCATTGAACTACTCATTCAGAAAGGAGTTCCTGAATCTCACATTATATTCC
TCAACCTTATCTCGGCGCCAGAAGGAATTCATTGTGTCTGCAAACGGTTTCCGGCATTGAAGATTGTGACATCTGAAATAGACCAG
TGTCTGAACAAAGAGTTCCGAGTTATACCAGGTCTAGGCGAGTTTGGTGATCGTTACTTCGGCACTGACGAGTAAAACCATGAGCC
ACCACTAAACATTGTGGCTGGATGGAGCAATAAAGGACGCGTTAGTGTCGTAATAGCTTGAGACAATAGTTGGAGTTGCATAACTG
CATGTCCTACACAAGAATCTTCTTAGCTCTTATGATTTATCAAGCTCTTATTAAACTCGAAATATTCTTGAACACATTGATTTCTG
ATTCTATGTTTTTTAATTACCAATTTTCTTACTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870669 ATUK/UPRT1 [Arabidopsis lyrata subsp. lyrata] | 2347 | 4e-262 |
| NP_198903 putative uracil phosphoribosyltransferase [Arabidopsis thaliana] | 2320 | 5e-259 |
| NP_189355 putative uracil phosphoribosyltransferase [Arabidopsis thaliana] | 2198 | 7e-245 |
| XP_002877025 hypothetical protein ARALYDRAFT_904933 [Arabidopsis lyrata subsp. lyrata] | 2196 | 1e-244 |
| XP_002298617 predicted protein [Populus trichocarpa] | 2173 | 6e-242 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FKS0 Uridine kinase-like protein 1, chloroplastic | 2320 | 2e-260 |
| Q9LK34 Uridine kinase-like protein 2, chloroplastic | 2198 | 3e-246 |
| O65583 Uridine kinase-like protein 4 | 1832 | 8e-204 |
| Q8VYB2 Uridine kinase-like protein 3 | 1794 | 2e-199 |
| Q9LTY6 Uridine kinase-like protein 5 | 1709 | 2e-189 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GJS2 Predicted protein | 2173 | 4e-242 |
| B9RBK1 Uracil phosphoribosyltransferase, putative | 2171 | 7e-242 |
| B9N0Z7 Predicted protein | 2084 | 8e-232 |
| B8B969 Uridine kinase | 1967 | 3e-218 |
| C5X4P8 Uridine kinase | 1963 | 9e-218 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G40870.1 AtUK/UPRT1 (Uridine kinase/Uracil phosphoribosyltransferase 1); ATP binding / kinase/ uracil phosphoribosyltransferase/ uridine kinase | 2332 | 8e-263 |
| AT3G27190.1 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative | 2211 | 8e-249 |
| AT4G26510.1 ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase | 1832 | 7e-205 |
| AT4G26510.2 ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase | 1832 | 7e-205 |
| AT1G55810.1 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative | 1794 | 2e-200 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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