 |
Information for unigene UN11073
| FASTA Sequence |
| Unigene ID: UN11073 | Length: 987 |
SSR | | GGACGTAGCGAAAACCCGATCTACGTCGTCTCTCTCTCTCCACAGATTTCTCGGAATCTCTCCAAACCTCCGATCGTCAACGATCT
GCGGCAAAGATGAACGACGCCGATGTGTCGATTCAGATCCAGCAGATGGTGAGATTCATCCGCCAAGAGGCGGAGGAGAAGGCAAA
CGAGATCTCCGTCTCCGCTGAAGAAGAATTCAACATCGAGAAGCTGCAGTTAGTTGAGGCGGAGAAGAAGAAGATCAGGCAAGACT
ATGAGAAGAAGGAGAAGCAAGCCGATGTTCGCAAGAAGATTGATTACTCGATGCAGCTAAATGCGTCAAGGATCAAAGTTCTTCAA
GCGCAGGATGATATTGTCAATGCTATGAAAGACCAAGCAGCAAAGGATCTTCTCAACGTCAGCGGCGATGAGGATGCCTACAAACA
GCTTCTTAAGGATCTCATTGTCCAGTGTTTGCTAAGGTTGAAAGAGCCTTCTGTGTTGTTGCGTTGCCGTGAAGAGGATTTGGGTT
TAGTTGAATCTATTCTTGATGACGCAAAGGAGGAGTATGCTGGTAAAGCAAATGTTCACGCTCCTGAGGTTGCCGTGGACACAACC
ATCTTCCTTCCCCCTCCTCCTACTTCTAGTGATTCTCATGGTCTCCACTGCTCTGGAGGTGTTGTGTTGGCTTCTCGGGATGGGAA
AATCGTGTGCGAGAACACACTCGATGCGCGTCTTGATGTGGCATTCCGTATGAAACTTCCAGTGATCCGCAGGTCGTTGTTCGGCC
AAGTTGCTGCCTAATGAATGAAAAGAGACAGAGAAGTGATTCAGACCGGTTTGTGTTTGGTTTTTTACCCATCTGGGAAAGGTTTC
TATTTGTTGTGATTCTTTAATGCCATAAAACCCATCGAACTCTTTGTTTATGCATCTGTATTTTTTCCTCATGCCCGAGTGTTATC
ATTGGCTATAGAAATAAATAAAGAGACGAAAGACTTTGTTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192853 V-type proton ATPase subunit E1 [Arabidopsis thaliana] | 1079 | 2e-115 |
| XP_002872553 hypothetical protein ARALYDRAFT_489953 [Arabidopsis lyrata subsp. lyrata] | 1078 | 2e-115 |
| CAA63086 V-type proton-ATPase [Arabidopsis thaliana] | 1074 | 7e-115 |
| AAM19709 vacuolar ATPase subunit E-like protein [Eutrema halophilum] | 1053 | 2e-112 |
| XP_002509910 vacuolar ATP synthase subunit E, putative [Ricinus communis] | 927 | 8e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39258 V-type proton ATPase subunit E1 | 1079 | 8e-117 |
| P0CAN7 V-type proton ATPase subunit E3 | 928 | 3e-099 |
| O23948 V-type proton ATPase subunit E | 879 | 1e-093 |
| Q9SWE7 V-type proton ATPase subunit E | 871 | 1e-092 |
| Q9MB46 V-type proton ATPase subunit E | 864 | 7e-092 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8S2S1 Vacuolar ATPase subunit E-like protein | 1053 | 1e-112 |
| B9RCM6 Vacuolar ATP synthase subunit E, putative | 927 | 5e-098 |
| B7FMK2 Putative uncharacterized protein | 909 | 6e-096 |
| B3TLU2 Vacuolar ATP synthase subunit E | 896 | 2e-094 |
| A9PI22 Putative uncharacterized protein | 869 | 3e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G11150.1 TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1); proton-transporting ATPase, rotational mechanism | 1080 | 6e-118 |
| AT1G64200.1 VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3); proton-transporting ATPase, rotational mechanism | 928 | 2e-100 |
| AT3G08560.1 VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2); hydrogen-exporting ATPase, phosphorylative mechanism / proton-transporting ATPase, rotational mechanism | 840 | 4e-090 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
