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Information for unigene UN11083

FASTA Sequence
Unigene ID: UN11083Length: 796 SSR 
GGAATTCTCTGATTAATCGAAGCAGAGAGAGAGAGAGAGAGAGATCGGGGGGCGTAATGGACGAGGTGATGACAGTGGCGGACGCC
GGCGGAAACAGGGCATTGTACGGATCTCCTCCGTCGCAGAACCAGTTTCCTCACAACCTTCCGATCATCTCCGCTTTTCTTGCATT
CGCCCTCGCTCAGTTCCTCAAAGTCTTCACTAATTGGTACAAAGAAAAGAGATGGGACTCTAAAAAGATGATTAGTTCTGGTGGAA
TGCCTTCCTCTCACTCTGCTACTGTCACTGCCTTAGCTCTTGCCATTGGCCTTGAGGAAGGTGCTGGATCACCCGCTTTTGCTATC
GCTCTTGTCTTAGCATGCGTTGTAATGTATGATGCCTCTGGGGTCAGGCTTCATGCTGGTCGCCAAGCTGAGCTACTGAATCAAAT
TGTTTGTGAGTTTCCGTCAGAGCATCCGTTATCCACAGTTAAACCCTTGCGTGAACTGCTCGGCCACACTCCTATCCAGGTTGCAG
CAGGTGCTGTTTTAGGATGCGTGGTAGCGTTTTTGATGAGGAGTACAAGCTAGTTTCTACACAACAAAGACTCCAAAATTCTTTTG
AAAATCATAGACCCTTGAGAGAAACTTCATTAGCGATCAAGCTGAGGGTAGATTATTGGAAGTAAATGGAAAATTATTTCACATCT
GTGTAATATATAGATCATAGTTTTAAGAGAATTGTCTAAGTGAACTGACTTGTCATTGTTATGCTATTTTTCTCTTCATAATTATT
CTTACCTTGTTTTGTGTTTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885453 hypothetical protein ARALYDRAFT_898610 [Arabidopsis lyrata subsp. lyrata]8066e-084
NP_188798 Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]7922e-082
BAB02356 unnamed protein product [Arabidopsis thaliana]6982e-071
XP_002529338 conserved hypothetical protein [Ricinus communis]6793e-069
XP_002317329 predicted protein [Populus trichocarpa]6533e-066

Swiss-Prot top hits (Blast detail)Scoree value
O32107 Uncharacterized membrane protein yuiD2302e-018

TrEMBL top hits (Blast detail)Scoree value
Q8L7M6 Putative uncharacterized protein At3g216207922e-082
Q9LVE5 Gb|AAB61516.16981e-071
B9STL9 Putative uncharacterized protein6792e-069
B9I154 Predicted protein6532e-066
B9IAH9 Predicted protein6318e-064

Arabidopsis top hits (Blast detail)Scoree value
AT3G21610.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 626 Blast hits to 626 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).7938e-085
AT3G21610.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 610 Blast hits to 610 proteins in 200 species: Archae - 0; Bacteria - 358; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).5643e-058
AT1G67600.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24350.1); Has 627 Blast hits to 627 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink).5089e-052
AT1G24350.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 626 Blast hits to 626 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).5016e-051
AT1G24350.2 INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 622 Blast hits to 622 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).4748e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  80%
 
71  20%

Unigene MembersMember information