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Information for unigene UN11123

FASTA Sequence
Unigene ID: UN11123Length: 858 SSR 
GTCAACTAGCTTCAAAATCACGTTAAAGCCCAAAGCTAGGAGATCTTTTAACAAAGCGTTTAAACAAACATCAAGGACATGAAAAG
ACGAGACAGGTTAAGGAAAAGGTTTCTTAAGCTACAAAAAGGATGATGATGATGATGATTTATATAATAAATACATTCAGAACATA
TCCATTTCCTCTTCAGCCTCGCCAACACAAACCTCTCTATAACAGAAAGGAGCTTAAAGAAAAAAAAACTCACTTTCTTTATTTTT
AGTAAGAGTTTTGCCAGTGCTGCTGCTGCTGGGTTTGATTCGAGGGCTGAGCTCCTCCTGCACCCTCTCTAGGGTTTTGCTGCTGG
CGCTCGTGCGACATTTCTGTTTGGGACTGATAGAAATTAGGGTAGCCATGAGATCCATAATGCTGTTGTTGCTGAGCTTGACGATA
CCCTCCTGCTGCTTGCTGACTCTGTTGGAGTTGCTGCTGTTGTTGTGCTTGGAGGTTGTAGTAAGTGTTAGCTGGAACACCTGACA
TGGTCCTCGAACCATGCCCGTGATGCCACATCGCTGAGTTATCATTCTGCTGCTGCTGATGCTGTTGTTGCTGCTGGAGTGCCAAC
AGATGACTGTTCTCTTTGTATTGAGAAGTCAGAACATCTTCATAACCGGCAGGAGCAGACGGTTGTTGGTTAAGAGGGAAGTTTCC
AGCGGATCCAACATTGGCGGAGGAGTTTCCAAATCCATAAGCGGAAGCAGGAGCTGTTGCAGACTGAGGCAAATTACTGGGAGAGA
GATTGGCTTTGTACTGCGGAAGCAAGGCAGCTAGTTGTTGCTGGTGGTATGAACTGTTACCAGCAAACGCTTGCTGAAAGCGGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174229 uncharacterized protein [Arabidopsis thaliana]8102e-084
AAG51729 unknown protein; 16040-11188 [Arabidopsis thaliana]8102e-084
XP_002893558 hypothetical protein ARALYDRAFT_473146 [Arabidopsis lyrata subsp. lyrata]8084e-084
AAG51735 unknown protein; 25451-20507 [Arabidopsis thaliana]8075e-084
NP_174230 Kinase-related protein [Arabidopsis thaliana]8075e-084

Swiss-Prot top hits (Blast detail)Scoree value
Q54IT1 Putative uncharacterized protein DDB_G02885371541e-009
Q556J6 Putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G02740071442e-008
Q552X2 Putative mediator of RNA polymerase II transcription subunit 261414e-008
Q55F68 Adenylate cyclase, terminal-differentiation specific1405e-008
Q54T18 Vacuolar protein-sorting-associated protein 361361e-007

TrEMBL top hits (Blast detail)Scoree value
Q9C7R5 Putative uncharacterized protein F15D2.278102e-084
Q8VZT4 Putative uncharacterized protein At1g293708073e-084
Q9C7R4 Putative uncharacterized protein F15D2.288073e-084
Q8W0Z3 At1g29350/F15D2_277439e-077
B9N9C2 Predicted protein5036e-049

Arabidopsis top hits (Blast detail)Scoree value
AT1G29350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: kinase-related (TAIR:AT1G29370.1); Has 13611 Blast hits to 7582 proteins in 387 species: Archae - 0; Bacteria - 354; Metazoa - 5683; Fungi - 1538; Plants - 892; Viruses - 68; Other Eukaryotes - 5076 (source: NCBI BLink).8117e-087
AT1G29370.1 kinase-related8082e-086
AT4G18150.1 unknown protein2732e-024
AT1G25540.1 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator1172e-006
AT1G25540.2 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator1172e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  50%
 
71  25%
 
191  25%

Unigene MembersMember information