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Information for unigene UN11149
| FASTA Sequence |
| Unigene ID: UN11149 | Length: 875 |
SSR | | CGAAAATAATATATTTGTTTTTAAGGGAGAGAAAAAAGGACAAGAGGAAGTCATAGAATGTAAAGTCTCCAAACACAAAAACAACA
ATAAATTCATTACAAGTCTTATAGAAATAAATGCAAGTTTGATCAAATTGTTTGAAGAGTTTCCTCACTCTTTGTGAATAATAATA
CATCTCAGGGACTGGGTTCGTCTCTAGGACTGTGGTCTTGTCCATTGGTCCCATTGCCGTTTTCCTGACCCTTCTTCTCAGGCATT
GGGCTCTTTTCATTGGGACTTGGGCTATGGTCTCTGTCTTTGAGTGGATGTGAGTTAAGAACCGTTGGTTCAGGGCTCCTGCTTCT
CGCAGCTGGTTCAGGAGTTCGCTTCTTTTCAGTCCTAACAGGGGATCTTGAGCGACTGTAGCTTGGGCTTCTGCTTCTGCTGCGGT
TTCTTCTACTACGACGGGGAGGAGGTGATCGAGACCTAACTGGTGATCTCGAGTAACTTTGGTCCCTCTTGAGCTTCTTGGGACTG
TTCTTGCAGTTCCTCTCTATATGACCTCTATCGCCACATCGATAACATTTGTTCTTCCAGTCACCAGCAGTGCAATCTCTAGCCCA
GTGTCCATCAAGACCACAGTTGAAGCAGCGTCCACTTCCTGGAGGAGGAGGTCCTCCTCTGCTTGAAGATATCTCTCGAGAACCAT
AACCAGAACCAGAACCACGCGGTGTCTAGATATATATATATACATGACGGACAACTTTTTAAGAATTGTTTTATAATCATATGAAA
AAGTATATATACCCTTTAGCAATTCAACAACGATGCGGCTTCCATCAACGTCTCTTCCATCTAAGCGGTACCTTGCATCATCAGCA
TCTCGGGGGTCGCTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_850280 arginine/serine-rich zinc knuckle-containing protein 33 [Arabidopsis thaliana] | 485 | 1e-046 |
| BAD44429 unknown protein [Arabidopsis thaliana] | 485 | 1e-046 |
| NP_973619 arginine/serine-rich zinc knuckle-containing protein 33 [Arabidopsis thaliana] | 485 | 1e-046 |
| NP_973620 arginine/serine-rich zinc knuckle-containing protein 33 [Arabidopsis thaliana] | 485 | 1e-046 |
| CAC03605 splicing factor RSZ33 [Arabidopsis thaliana] | 481 | 3e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P30352 Splicing factor, arginine/serine-rich 2 | 132 | 4e-007 |
| Q5R1W5 Splicing factor, arginine/serine-rich 2 | 131 | 6e-007 |
| Q06A98 Splicing factor, arginine/serine-rich 2 | 131 | 6e-007 |
| Q5ZMJ9 Serine/arginine repetitive matrix protein 1 | 131 | 6e-007 |
| Q3MHR5 Splicing factor, arginine/serine-rich 2 | 130 | 7e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3EBL3 Putative uncharacterized protein At2g37340.2 | 485 | 8e-047 |
| Q67Y02 Putative uncharacterized protein At2g37340 | 485 | 8e-047 |
| Q8VYA5 Putative uncharacterized protein At2g37340 | 485 | 8e-047 |
| Q9ZUT2 Putative uncharacterized protein At2g37340 | 485 | 8e-047 |
| Q9FYA7 Splicing factor RSZ33 | 481 | 2e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G37340.2 RSZ33; nucleic acid binding / zinc ion binding | 485 | 5e-049 |
| AT2G37340.3 RSZ33; nucleic acid binding / nucleotide binding / zinc ion binding | 485 | 5e-049 |
| AT2G37340.1 RSZ33; nucleic acid binding / nucleotide binding / zinc ion binding | 485 | 5e-049 |
| AT3G53500.1 zinc knuckle (CCHC-type) family protein | 468 | 4e-047 |
| AT3G53500.2 zinc knuckle (CCHC-type) family protein | 468 | 4e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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