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Information for unigene UN11164

FASTA Sequence
Unigene ID: UN11164Length: 864 SSR 
GATATGAAACAGAGAAAATATATATTTTCTTAGATAGCATAGTTCCGGGAAATTGAAACAACATCAAAATTCAAAATCATTTTCTC
AGGCAAGAACATCTATTAATTTATAGAACCAACAGAAATACATCACAAGAGCATTTAACCAATCAACCTAAAGCAATCTCTCATAT
TCCACTTTTGAACACATAACCCGGTTGTTACCACTAAACCAAGTGGTTCCCCTCTGTTATTATTAGTTTGAGCAGCATCCACCTTT
CTTCACAGCAGAAACATCTTTACCAAGATCGATCTTGTCTCCTTTGGACGGAACATTAGCGGATTCGCTCGCAGCTTCCATTGCCT
TTCTGCTCACAACGCAGTGAATCTGAGTGAGGACTTCCGCGAAAGCGTTCTCAACATTGGTAGAGTCGAGAGCCGAAGTTTCCATG
AAGTAAAGAGACTCTTTCTCAGCGAATGACTTGGCATCGTCTGTCTGAACAGCCACGAGGTGGCGGAGATCAGATTTGTTCCCCAC
GAGCATCACTACGATGTTTGGATCGGTGTGGTTTCTGAGCTTTGATGACTTTATCGTCAACATTCAAGCTCCTAGTCGCGAACTCG
ACTCCGATGGTTGATTTGGACTCGAGGCTGAACTCGTTCTTGGTGAATCGTGAAAGCAGATTGGACTTCCCAACACCAGAGTCACC
GATGAGAACAACCTTGAAAAGGTAATCGTATTCATCGTCTGCTTTGTAACCCGCCATTGAGAGAGAGAGAGAGAGAGAGATCAAAA
TGTTTTTTTGCGCTTTTATTTAAAAAGCTGAAAAACCCTAACGAGATTTACGCCAGGATTTTGTTCTCTAGATCTTTTCGACTTGT
GCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199387 Ras-related protein RABA1c [Arabidopsis thaliana]5073e-049
AAM60865 Rab-type small GTP-binding protein-like [Arabidopsis thaliana]5039e-049
NP_193615 RAB GTPase homolog A1D [Arabidopsis thaliana]4303e-040
XP_002867975 hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp. lyrata]4303e-040
XP_002268815 PREDICTED: hypothetical protein [Vitis vinifera]4241e-039

Swiss-Prot top hits (Blast detail)Scoree value
Q9FK68 Ras-related protein RABA1c5071e-050
P40393 Ras-related protein RIC24165e-040
P28185 Ras-related protein RABA1a3905e-037
Q40194 Ras-related protein Rab11D3735e-035
Q39222 Ras-related protein RABA1b3691e-034

TrEMBL top hits (Blast detail)Scoree value
Q9SN35 Putative ras-related GTP binding protein4302e-040
B2ZAR1 Putative GTP-binding protein4274e-040
B2ZAS4 Putative GTP-binding protein4265e-040
Q6DXU0 Putative GTP-binding protein4265e-040
B4FIB2 Putative uncharacterized protein4249e-040

Arabidopsis top hits (Blast detail)Scoree value
AT5G45750.1 AtRABA1c (Arabidopsis Rab GTPase homolog A1c); GTP binding5081e-051
AT4G18800.1 ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding4344e-043
AT1G06400.1 ARA-2; GTP binding3914e-038
AT1G16920.1 ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding3701e-035
AT5G60860.1 AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding3458e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  33%
 
72  67%

Unigene MembersMember information