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Information for unigene UN11176
| FASTA Sequence |
| Unigene ID: UN11176 | Length: 843 |
SSR | | AGGTAAAGAAGAGGTGACATAAATTAATCAAAGATATCAGTCAAGTGACAATGATTGATGCATCATAACCTGTAACGTGTAACCTA
AGTAATCAAGGAACACTAGTAGTCTCTGTGTGTGTGTGTGTGTATGAGCCTTTATATACCTCATTTACAAAGAAGAGAATGAGAAA
GCGAGGTCTGGAATTCAAAGATGTCTTCTGCACAAGGGACAAGAAGCATGCCTGCAAAGCCACTTGTCGATGCATGGTAGGTGGAA
CATATGATGGCACTGCGGCAAAATTCTAACAGTCTCTCCCACCTGAAAGTCCTGAAGGCAGACAGAGCAAGAGACCATCTCCCCTG
AGCTGTCTGTGATTCGGACCTTTGGGATCCTGTCGAGAGAATCCCCAGTGAGACCATTTGAAATAGTAGTGTCGAAGATGTCAGTT
TGGTCGGGGAACTGTGATTCCACGGCTCCCATCTGGTTCTGGACCGCACTTAGTATTGCAGGACCAATACGCTCACGAACTAGCCT
CCCGCTCAAAAGGCTAGCAATGACATCAATCTAATGAAACAAAAAAGAAAACAAGCAGTCCAGAATATTGGGACTGATAGAAAAAG
GAGGTAGGTTTAGGGAAAAAATGGGTTACCAAGTAGAGAAGGCAAGCAATTCCAGACTGATCGGATTGCCAGAGGAGGAGAGAAGA
TTCAAGGACATCGATGGAGAAGACAGCACCAGAAATAGCACCAACGGCGGCTCCTCTGATGAAACCACTCTCTGTTTCTTGGCCGA
TCAAAGCCCCTGTAAAGGCTCCTAGCAAAGTCCCCACTAGAGCGAAGACGAAAGTGAAGAGAGCGGAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201408 NEP1-interacting protein-like 1 [Arabidopsis thaliana] | 558 | 4e-055 |
| XP_002866776 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 558 | 4e-055 |
| XP_002327636 predicted protein [Populus trichocarpa] | 490 | 3e-047 |
| XP_002530631 RING-H2 finger protein ATL4M, putative [Ricinus communis] | 488 | 5e-047 |
| CAP03014 NEP1-interacting protein [Spinacia oleracea] | 483 | 2e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FKX5 RING-H2 finger protein ATL5P | 558 | 2e-056 |
| Q8GT75 RING-H2 finger protein ATL4M | 466 | 8e-046 |
| Q8GT74 RING-H2 finger protein ATL2B | 451 | 4e-044 |
| Q8LBA0 RING-H2 finger protein ATL1Q | 244 | 4e-020 |
| Q9SRQ8 RING-H2 finger protein ATL3A | 187 | 2e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MXB1 Predicted protein | 490 | 2e-047 |
| B9SXB2 RING-H2 finger protein ATL4M, putative | 488 | 3e-047 |
| A8E124 NEP1-interacting protein | 483 | 1e-046 |
| B9N918 Predicted protein | 477 | 6e-046 |
| C6SY09 Putative uncharacterized protein | 463 | 3e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G66070.1 zinc finger (C3HC4-type RING finger) family protein | 559 | 1e-057 |
| AT4G35840.1 zinc finger (C3HC4-type RING finger) family protein | 467 | 5e-047 |
| AT2G17730.1 zinc finger (C3HC4-type RING finger) family protein | 452 | 3e-045 |
| AT5G66070.2 zinc finger (C3HC4-type RING finger) family protein | 441 | 6e-044 |
| AT1G74410.1 zinc finger (C3HC4-type RING finger) family protein | 244 | 4e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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