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Information for unigene UN11226
| FASTA Sequence |
| Unigene ID: UN11226 | Length: 1456 |
SSR | | ACGAACAAAAGCAGGTTTCTAATAAGTCCATGACCAACACAACAGTATAAATAACTAAAAACTCCCATTAAACAAAAACAATCTTC
AAACCTCACTCTCAGTGTTTCTCTCTTCTGCTCTGTGTAACTTCTTTTCTCTAAAAGTTAAAACCCACATCGAAATTAAAACTCCC
TACGACCCAAAGGTATCCCAAAGCAAAAGACAACAGAAGCATCATCAAGCTTCCAAGCATTACACAGTGGAAAACAAAAGACTTTA
AGAGTTTCAGACAAACATCTTTACATGCCGGTGAGAGCAGAGATATATATATATGTATAATAAACTTGTAGCTGTTACTGTTGTTG
ACGAGGGACAGCACGGGAATGAACAGGTGTCTTTGAGGGACTCACCCTTATCGGTAAAGAACCAAGAAGCACGCCACTGCAATTGA
GAGCCGTTATTGCACTTTCAGCCATGGCAAACTCAACGAAACCGATTCTAGTTGGATGATGATAATCTCCCAAAAGACTCAGACGT
AACACCTCTCCACACACAGCCTCAAAGAAGAGTTTAATGTCCGTTTGAGTAACCTTCTTGTCGATGTTAGTGCAATAGATAGTTCT
CGCACACTTCTCACGCTCATCTTCAGTCTAAGAGCCAAAAACAGGACTAGTCTTGAGTCTTGAGCACATAACTTTGAACTCAGAAT
GGGATGAAACAGAAGAAAAAAAAACAAAAGTCTCTCACCCTAGGCAATAACGTCGGGTTAACCGGTGCAATAGCAGTTTTGGACGG
CATAACTTTCACAGGATAGAATCCCAGCACCGTCCCGGACAGATTCAGCGCAGCTCTTGAACCCACTTCATCAGTGAACTCGATGA
AAGCAAACTTAAGTACTGAGTTTGGGTCCCCGCAAATGCGACAGTCAACAAACTGTCCAAAGCCGATGAACAAACCAGCAAGCTGC
TCCTCAGTGACCTGTTGGTCAATATCAGACACATAGACAGTTCTTCGAATGACGTCTTCACGCTGAGCCATACTTGTCCGAGGGTC
ATCCTCCGTTTCCCTTGTGGTCCTCCGAACGGCTTCCGTCGAAAACCGCCGTCTTCGTTGACGGGGAAAGAATCAGGGACGGTGAA
GAAACCACCGTTAGCTCCTTGCTTAGTGAGGGAGGGAGGAACGAACTCTTTAGCCATGGGGTTAAGCTTAGTTAAAAGCTCATTCA
GCTCTCTCATCTCACGCTTGAAGCTCTCTCCACCATCGGATCTGAGCTCACCATTTTCACCCTGATCTCCTGATCCTTGACTAGTG
ACGGAAGACGGCGGCGATGTGGAGATCGCAGCACCAACCTCTGTATCAGCTCCTCCGACTTTCTCAACGATCGCCATGATCAGATA
AATCGGTAATTGCAGAAGCCCAGAAAGAAAGATTGGACTTTTCCTAAAGGGAACCCACGATCAGGTTAACACGAAATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192799 CTC-interacting domain 12 protein [Arabidopsis thaliana] | 497 | 1e-047 |
| NP_001031614 CTC-interacting domain 12 protein [Arabidopsis thaliana] | 497 | 1e-047 |
| XP_002872527 RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata] | 496 | 1e-047 |
| AAA86641 RNA-binding protein [Arabidopsis thaliana] | 488 | 1e-046 |
| XP_002532053 RNA-binding protein, putative [Ricinus communis] | 464 | 7e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8WXA9 Splicing factor, arginine/serine-rich 12 | 137 | 2e-007 |
| Q8BZX4 Splicing factor, arginine/serine-rich 12 | 137 | 2e-007 |
| Q9JKL7 Splicing factor, arginine/serine-rich 12 | 137 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V3J9 Putative uncharacterized protein At4g10610.2 | 497 | 7e-048 |
| Q9S7N9 AT4g10610/T4F9_70 | 497 | 7e-048 |
| Q38915 RNA-binding protein | 488 | 8e-047 |
| B9T1D4 RNA-binding protein, putative | 464 | 5e-044 |
| Q2V4J4 Putative uncharacterized protein At1g32790.2 | 459 | 2e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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