Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN11240

FASTA Sequence
Unigene ID: UN11240Length: 1146 SSR 
GGGGGGAAAGGGAAAACATGCATTACCTCAAGAGTTTACCCAAAATTGGCAATAGGAGAAAATACGCATCTCTTTGTATTTAACAA
TGGATCTCAGAATGTTGATGTTTTAAGCTTAAGTGCTTGGAGCATGAAGTCTTCTCTCTAAAATCACTTCTTCATGTGTAAGAAAT
TCTTGAAACTCTTGGCGCGTCTTTTCTTTTATTTAGTCATCATTCTCATCATCATCATCATCATATTCATCTTCATCAGCAAGAGC
CTCTCCAGTAAACCATGAAACTGCGTGAGGGATCAGTTTGTCTCTGATTGTCACAGCAATGTCATAGTCCTGATCCGTCAGGTTTT
GGAGTTCTTCATCCATAGTTGTAAAACATTCATCAACTTCATCAATCTCAGGGGGCTTGAAGAAGTTAAAGAAACTCTCGCAGTTT
TCGGTTTTAGTCATGGGGATGTTGTTCACTTTCTTTGTCCCCTTCTTTGGCCTCTTCTTGACAACAACCTTATGAGTCAAACACTT
ACCTGGACACCATTCTATCTCCGTTCCAATCACTTTATCAAGAACAGGGCCATCATCATCGTCATCGGTCACATGGTAAGTTTTAG
ACAGAACCGAGTTCTTGAAGTAAGGATTAGGATCAAAGAGAAACTCCAGCTTGAAGTTTCTTGAACTGTTTTCTACTCTGCAACAT
CTGATGTCTTTGAGATACTTCAAAGCTCCCTCATCTCTTTCGGTTATCTCGTTTGCTAGCATCTCGTTGGTTTTCATTGCAATCAA
CCAGAAGTTAGGTACTCCTCCTTTCTCCGTCTCAGCTTCAGCCACACCATTCACAATTTCATATCTCTTATCAAAAAGCGGCTTGT
AGAGATTGTTGTATTTTGCTTCCAATGCAGATTTTTCTTGAAGAAACTTCTCCTCGAGTTCGTCGTGTTTGACCTGAATGTCCTTG
AGAAACAGAACACGTTTGGTGACTTTAGGTGAGAGTTTCTTCGTATCAAAGGTTCGTTTTATTGTTAGGTTCTTAAGATCCTCGGT
AAGATCAGGATCCTCTGGAATAATATCTAAGGCATCAGATGAATCGCCTCCACTGTTATGAACAGCTTCGATGGACGTGATGTTGT
TCTCTTCGTTGCTCATGTTTCGTGAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882846 NAP1_4 [Arabidopsis lyrata subsp. lyrata]12541e-135
NP_187993 nucleosome assembly protein1;4 [Arabidopsis thaliana]12361e-133
BAB01928 nucleosome assembly protein-like [Arabidopsis thaliana]11733e-126
CAD27461 nucleosome assembly protein 1-like protein 2 [Nicotiana tabacum]8355e-087
AAR83873 induced stolon tip protein NAP1Ps [Capsicum annuum]4942e-047

Swiss-Prot top hits (Blast detail)Scoree value
P78920 Putative nucleosome assembly protein C2D10.11C3002e-026
Q9LIB9 Beta-fructofuranosidase, insoluble isoenzyme CWINV52285e-018
Q67XZ3 Beta-fructofuranosidase, insoluble isoenzyme CWINV31991e-014
Q43866 Beta-fructofuranosidase, insoluble isoenzyme CWINV11873e-013
P26792 Beta-fructofuranosidase, insoluble isoenzyme 11757e-012

TrEMBL top hits (Blast detail)Scoree value
Q9LIC0 Nucleosome assembly protein-like11732e-126
Q70Z18 Nucleosome assembly protein 1-like protein 28353e-087
Q6RJX6 Induced stolon tip protein NAP1Ps (Fragment)4941e-047
B6AEJ5 Nucleosome assembly protein, putative4161e-038
B8AW64 Putative uncharacterized protein2117e-015

Arabidopsis top hits (Blast detail)Scoree value
AT3G13782.1 NAP1;4 (NUCLEOSOME ASSEMBLY PROTEIN1;4); DNA binding / chromatin binding12034e-132
AT2G19480.1 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding6407e-067
AT2G19480.2 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding / binding6407e-067
AT4G26110.1 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding6362e-066
AT4G26110.2 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding6362e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  50%
 
62  50%

Unigene MembersMember information