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Information for unigene UN11240
| FASTA Sequence |
| Unigene ID: UN11240 | Length: 1146 |
SSR | | GGGGGGAAAGGGAAAACATGCATTACCTCAAGAGTTTACCCAAAATTGGCAATAGGAGAAAATACGCATCTCTTTGTATTTAACAA
TGGATCTCAGAATGTTGATGTTTTAAGCTTAAGTGCTTGGAGCATGAAGTCTTCTCTCTAAAATCACTTCTTCATGTGTAAGAAAT
TCTTGAAACTCTTGGCGCGTCTTTTCTTTTATTTAGTCATCATTCTCATCATCATCATCATCATATTCATCTTCATCAGCAAGAGC
CTCTCCAGTAAACCATGAAACTGCGTGAGGGATCAGTTTGTCTCTGATTGTCACAGCAATGTCATAGTCCTGATCCGTCAGGTTTT
GGAGTTCTTCATCCATAGTTGTAAAACATTCATCAACTTCATCAATCTCAGGGGGCTTGAAGAAGTTAAAGAAACTCTCGCAGTTT
TCGGTTTTAGTCATGGGGATGTTGTTCACTTTCTTTGTCCCCTTCTTTGGCCTCTTCTTGACAACAACCTTATGAGTCAAACACTT
ACCTGGACACCATTCTATCTCCGTTCCAATCACTTTATCAAGAACAGGGCCATCATCATCGTCATCGGTCACATGGTAAGTTTTAG
ACAGAACCGAGTTCTTGAAGTAAGGATTAGGATCAAAGAGAAACTCCAGCTTGAAGTTTCTTGAACTGTTTTCTACTCTGCAACAT
CTGATGTCTTTGAGATACTTCAAAGCTCCCTCATCTCTTTCGGTTATCTCGTTTGCTAGCATCTCGTTGGTTTTCATTGCAATCAA
CCAGAAGTTAGGTACTCCTCCTTTCTCCGTCTCAGCTTCAGCCACACCATTCACAATTTCATATCTCTTATCAAAAAGCGGCTTGT
AGAGATTGTTGTATTTTGCTTCCAATGCAGATTTTTCTTGAAGAAACTTCTCCTCGAGTTCGTCGTGTTTGACCTGAATGTCCTTG
AGAAACAGAACACGTTTGGTGACTTTAGGTGAGAGTTTCTTCGTATCAAAGGTTCGTTTTATTGTTAGGTTCTTAAGATCCTCGGT
AAGATCAGGATCCTCTGGAATAATATCTAAGGCATCAGATGAATCGCCTCCACTGTTATGAACAGCTTCGATGGACGTGATGTTGT
TCTCTTCGTTGCTCATGTTTCGTGAGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882846 NAP1_4 [Arabidopsis lyrata subsp. lyrata] | 1254 | 1e-135 |
| NP_187993 nucleosome assembly protein1;4 [Arabidopsis thaliana] | 1236 | 1e-133 |
| BAB01928 nucleosome assembly protein-like [Arabidopsis thaliana] | 1173 | 3e-126 |
| CAD27461 nucleosome assembly protein 1-like protein 2 [Nicotiana tabacum] | 835 | 5e-087 |
| AAR83873 induced stolon tip protein NAP1Ps [Capsicum annuum] | 494 | 2e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P78920 Putative nucleosome assembly protein C2D10.11C | 300 | 2e-026 |
| Q9LIB9 Beta-fructofuranosidase, insoluble isoenzyme CWINV5 | 228 | 5e-018 |
| Q67XZ3 Beta-fructofuranosidase, insoluble isoenzyme CWINV3 | 199 | 1e-014 |
| Q43866 Beta-fructofuranosidase, insoluble isoenzyme CWINV1 | 187 | 3e-013 |
| P26792 Beta-fructofuranosidase, insoluble isoenzyme 1 | 175 | 7e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIC0 Nucleosome assembly protein-like | 1173 | 2e-126 |
| Q70Z18 Nucleosome assembly protein 1-like protein 2 | 835 | 3e-087 |
| Q6RJX6 Induced stolon tip protein NAP1Ps (Fragment) | 494 | 1e-047 |
| B6AEJ5 Nucleosome assembly protein, putative | 416 | 1e-038 |
| B8AW64 Putative uncharacterized protein | 211 | 7e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13782.1 NAP1;4 (NUCLEOSOME ASSEMBLY PROTEIN1;4); DNA binding / chromatin binding | 1203 | 4e-132 |
| AT2G19480.1 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding | 640 | 7e-067 |
| AT2G19480.2 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding / binding | 640 | 7e-067 |
| AT4G26110.1 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding | 636 | 2e-066 |
| AT4G26110.2 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding | 636 | 2e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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