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Information for unigene UN11264

FASTA Sequence
Unigene ID: UN11264Length: 1206 SSR 
GCTAAAATCTCACCTTCTTAATAATTTTACCAACATGTACATATAGATCGATAGTTGTATAAACATAGCACCAGTACTAGTACATT
GATCAAAGTTGTAGATAAGCATGATAACAACAGTAGTCTGATTTAACAGGAAAGTCAAACAACAGATTGTTGTCAAAAGTCTCCAA
AACACCATCAACATCTCAGCTTTTGTGAATTCCTTGATTCTGGTGAAAAAGAAAACAGAGCTCCACCTTCACTTCTTAGCCTTAAG
GCGAGAAGAACGGCGAGTGGAAGACGTGGGTGCAGGAGATTGGAGTGGGGAATTGCTAGATCGTTTCTGTCGCCGATTCACTTGAA
CCTTAGATACCTTGTTCTCTGGAGTAAGCATGCTTGTATCAGTAGTAATTGACATAGCTGGAGCTGAAGCAGATATGATGGAAGTT
TCCTGTGGCAGGTTTTCTGAGTGTGCTGGTAGTTCAGATAAGGTAGCTTTCTGAAACTTATCCCTCATCAGACGAACAAATCCGAA
AAGGTCATTGGTTTTATTCAATTCTTGGACCATCTCATCCATGTCATCTAACTGTGGGTTGCAATCCAATAGTGTGTAGATGTCGT
TTCCATAGTGAACTGTGAATGAAAACTCGCGTGTCGGCCTTTTTGCATCAATGTTGGTGAATGTGAACTTAACTCCATGTCCAGCT
TCAACATGAAAGCCAAGAGCCTGATTATACCAAGATATGGCTTCATCAATATGGGATTTGTTTTCCGTGACTTGACCAGCATTGTC
CTTGGATACTGATAAGCCTTGCAAACGGTGGGAGATAGTTTTGGCACGCTCTTCCTTCTTTGACTTGTGTAACTGCAGAGTTCTTT
TAAGCACTTGGATTCGAGATTGTGTTGCAGAAATGGAGTCCCTTAAACCCATTTGCATCCCCTCTTTACGGGTTTTAGCTGACAAC
ACTTTAACGAGCTCATACTCTGCTTCTCTCAGGTCCGCTTTCACATTTGCTAGTTCCACTTGGCTCTGAGCAGTGGCTTTAGCTCG
GTCAAGTAGAGAGTCCATAGATCTGTGGAAGGGGGAAGCGATGAAGGAATCGATTTGAAGCCGCTGTTCCTCGATATCTTTCTCAC
ACACGATTCCCATAGTGTTGTTCTTCGTTGTATCTCCGCTAATCTGTTCCATCACCAGAGAGAGAGAGAGAGAGCTTCTTAGCCCC
AC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875887 predicted protein [Arabidopsis lyrata subsp. lyrata]11662e-125
NP_566900 kinetochore protein Spc25 [Arabidopsis thaliana]11601e-124
AAM65290 unknown [Arabidopsis thaliana]11322e-121
CAB51068 putative protein [Arabidopsis thaliana]7593e-078
XP_002278279 PREDICTED: hypothetical protein [Vitis vinifera]6268e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q10430 Kinetochore protein spc251604e-010
Q5KGI8 Probable kinetochore protein SPC251542e-009
Q9HBM1 Kinetochore protein Spc251292e-006

TrEMBL top hits (Blast detail)Scoree value
Q93VK9 Putative uncharacterized protein At3g4821011607e-125
Q8LAK6 Putative uncharacterized protein11321e-121
Q9STR7 Putative uncharacterized protein T24C20_907592e-078
B9RAX8 Putative uncharacterized protein6176e-062
B9IEV8 Predicted protein5522e-054

Arabidopsis top hits (Blast detail)Scoree value
AT3G48210.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 142 Blast hits to 142 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 34; Plants - 34; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).11613e-127

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information