Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN11268

FASTA Sequence
Unigene ID: UN11268Length: 2219 SSR 
CTTTCCAACGCGCTTCGCTCTTCTTCTTCTTCTTCACCTCCGATCCATCGTAAAACCATGGGTAACGGAAACTCAACGGAGACTAA
GGAGTCGCGCCGATCAAAGATGCGGCAGAAGCTTCAGAACTTCAGCAGCCGCCGCCGTCTTCGTCGTCCTGGATCCGGAAGCGTCT
CCGGATTAGCCAGTCAGAGATCCGTGAGCCAAGATGATTTCGCCGGCATTGCTCTTCTCACTCTCATCGGCGCGGAGATGAAGTTC
AAGGACAAATGGCTGGCCTGTGTTTCCTTCGGTGAACAAACATTCCGTACCGGAATCTCTGATTCTACTGATAAGCCGATTTGGAA
TTCGGAGAAGAAGCTCCTCCTGGAGAAAAATGGACCGAGTCTAGCTAGGATCTCTGTATTTGAGACCAATAGAATGTCGAAGAACA
ATATCATCGGTTATTGTGATCTCGATCTCCTTGAGTTTGTAGTGCAGGAACCTGACTCTACTTGCAAGCCATTTGACCTGCTAGAC
CCGGCCTCGTCCGATGTTGTTGGCAGCATGTTCATTTCATGTTCCGTTGAGGATCCTGTTGAAACCGAGAAATGTTTCGCGAAGCG
AATTTTGTCCATAGTGGACTATAATGAAGATGGACATCTCTCATTCTCAGAGTTCTCTGATCTGATGAACGCTTTTGGGAATCTTG
TGGCTTCTAAAAAGAAAGAGGAGTTGTTCAAAGCGGCTGACCTTAATGGAGATGGTGTTGTTACGATTGATGAGTTGGCTGCACTT
CTTGCCGTCCAACAAGAACAAGAGCCAATTATAAATAGTTGTCCGGTCTGTGGGGAGGCTCTTCAACTGTCTGACAAGTTCAACGC
AATGATCCATATGACTCTTTGTTTTGACGAAGGAACTGGTAATCAAATGACCGGAGGGTTCTTGACTGATAGGCAGGCTTCATATG
GGTGGATGTTCAAACTAAGTGAATGGACTCATCTATCAACTTATGATGTTGGTTTGAATACTGGTTCAAGTGCTTCTCATATTGTG
GTGATTGATCGGAAGACTAAGAGGCTCGTCGAAGAGTTGATTGATTCAAAGATTGTTATGTCGATGAGAGCTATTTACCAGTCAAA
AATTGGACTCGGGCTTATGGATCAAGGAGCAAAAGAGATTTTGCAGAACCTGAGAAGCAGGGGATGAAAATGAACACAGCTGAATC
TGCCCAAAATATACCCAGCTTTCTCGAGTTTTTCAAGGATCAAATAAACATGTCTGAAGTCAAGTATCCTCTAGACCATTTTAAGA
CGTTCAATGAATTCTTCATACGGGAGTTAAAGCCTGGTGCAAGACCAATTGCGTGCATTGATCGGGATGATGTTGCTGTATCAGCT
GCTGATTGTCGATTAATGGCGTTTCAATCGTTGGATGATAGCACGCGGTTCTGGATCAAGGGTCGTAAGTTCTCAATTAAAGGCCT
CCTTGGGAAGGATGTGGATTCAGATGCTTTCCTTGATGGATCTTTAGTGATATTCCGATTGGCTCCACAGGACTATCATCGTTTTC
ATTCTCCTGTTTCTGGCGTCATTGAAAAGTTTGTCGACGTTCCTGGAAGCTTATATACAGTTAATCCGATTACAGTCAATAGCAAG
TACTGTAATGTGTTCACTGAGAATAAACGGACCGTCGTAATGATATCAACAGCAGAGTTTGGAAAGGTCGCATTTGTTGCGATTGG
AGCCACAATGGTTGGTAGCATCAGCTTTGTTAGAAAAGAGGGAGACCATATAAAGAAAGGAGACGAGCTTGGTTACTTCTCATTTG
GTGGAAGCACAGTTATATGCGTCTTTGAAAAGGACTCGATTAAGATCGACGAGGATCTCTTAGCTAACAGCGCTAGGTCCTTGGAG
ACTTTAGTTACTGTCGGAATGCAACTAGGTGTCTCATTTCCAAAGCTGGAAAACTGTTCTCTTGAATCCTGAACTGCCTCAAACTA
GTCAAAACTACGAATGATGTACTTCGGTTTGGTTTGATTTGTTTTAGTTTTCTTTTTTTTTTTTCCTTCAGAAACTCAAATTATCT
TTTGTTTGATACACAATGACTTTGCTCTGTATATATAAACACCAGTATGTCCAGGCATTGGTACTTGTTAATATTTGCTCTGTTTC
GTTGTTTTCTGCCAGGTGACAATTTTACATGCAAATAGAGCTAGACACATGTCTTTTCTCTATAACTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567736 phosphatidylserine decarboxylase 3 [Arabidopsis thaliana]17713e-195
XP_002869638 phosphatidylserine decarboxylase [Arabidopsis lyrata subsp. lyrata]17491e-192
ABO26298 phosphatidylserine decarboxylase [Arabidopsis thaliana]15931e-174
NP_200529 phosphatidylserine decarboxylase 2 [Arabidopsis thaliana]15885e-174
BAD94480 phosphatidylserine decarboxylase like protein [Arabidopsis thaliana]12822e-138

Swiss-Prot top hits (Blast detail)Scoree value
O14111 C2 domain-containing protein C31G5.156312e-064
P53037 Phosphatidylserine decarboxylase proenzyme 25066e-050
Q8RGF2 Phosphatidylserine decarboxylase proenzyme4994e-049
B0B8S5 Phosphatidylserine decarboxylase proenzyme4709e-046
Q3KKZ5 Phosphatidylserine decarboxylase proenzyme4709e-046

TrEMBL top hits (Blast detail)Scoree value
A4GNA8 Phosphatidylserine decarboxylase17712e-195
A4GNA9 Phosphatidylserine decarboxylase15939e-175
Q56ZL3 Phosphatidylserine decarboxylase like protein12821e-138
Q0WW96 Phosphatidylserine decarboxylase like protein12792e-138
Q9SZH1 Putative phosphatidylserine decarboxylase12202e-131

Arabidopsis top hits (Blast detail)Scoree value
AT4G25970.1 PSD3 (phosphatidylserine decarboxylase 3); phosphatidylserine decarboxylase17711e-197
AT5G57190.1 PSD2 (phosphatidylserine decarboxylase 2); phosphatidylserine decarboxylase15935e-177

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  14%
 
71  14%
 
84  57%
 
61  14%

Unigene MembersMember information