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Information for unigene UN11298

FASTA Sequence
Unigene ID: UN11298Length: 1219 SSR 
AAAAAAAAATTAACTTCATTTATTAAATTATAACAACAACAAATTTCCCACTATACACCAACGCTCTACAAACCCAAAACAAACAA
AGTAAAAGCCAACTTAAATTAAAAGATTAACAATACTTCCAAATAGTCATATTCAAATAAGTGATGATTGTTTCTTCCTCTGATGA
TGATGATGATGATGATGATGATGATGATGATGATGATAATGACATGGTGGTGGTGCCCTCGAGCTATATATAGGATCATGAATCAG
TTGAATTGGTGGTCGTGATTTGGGTCAGACCATCCCCAGTAACCGGCCGACGTCGTTTCATCAATGCCATTAAACATGTTACAGAA
GCTCTCTTCTTGAACCACTTCATTATTCTGTTGATGATGGTCATGATTATGTGTAGAAGACGGAATCGATGAAGGGAAAAGGTTTT
TGATCGTGTTCACATGTGTTGTAGTGGTCTCTCTAGGAATCTCCAGATTTATGTCTGAGCTATTTTCTGTGCTTCCATTGTTGCTC
CATGAAGCTTCTGTTTCCCTCTTTATTATGCTTGCTTCGTTACAATCTTTGTTCTTTAAAGACATTACCTCAGCAAGGAGTTTCTT
GTTGTGGGCAAGAAGAGAATCATTGTCAGACTTAAGAGAATCAAACTGTTTCTTGAGTGCATCATAGTCTCTTTCGAGCTGTCTAG
TCTTCCACCTAGCTCTCCTGTTTTGAAACCAGATCGCTATTTGCCTCGGTTGCATCCCCAATGCTTTAGCTAGTTGTATCTTCCTC
TCTGGATCAAGCTTGTTACCAAGCTCGAAGCTCTTTTCTAATACCTTAACTTGCTCTAATTGCAGCCTCTTCTTCTTCTCTCCAAG
CATCATATGTGACCCATCGTCTGATAAATTCTCCTCATCAACAGATTGATGAGGATCGTCTCGCACGTTCGTTAATGACATAGATC
TGTTCATCATGTAGTTTCCTCCTCCATTGAAGGGATGAGGAGGAAGACAAGAAGGGAGCTGATCAGGGGTAATGTCTTCATGAAGT
TGTTGGAACATAAAACCATGTTGAGGAAATGCCATTTCCAATCTAAATCCTGCGGCTGCGTCTGTGGTTGGATCAAACACATGCAA
ATTAACTCAACCTGCAGTGAGTGATATATTTGGATTGGGAAGTTATCAGCTAGGAGTGTTCAAATGCTTATATTTTGGAAATGAAG
AACAAATGAATCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_186771 homeobox-leucine zipper protein ATHB-20 [Arabidopsis thaliana]12541e-135
XP_002884288 ATHB20 [Arabidopsis lyrata subsp. lyrata]12451e-134
AAM65170 putative homeobox-leucine zipper protein, HAT7 [Arabidopsis thaliana]12074e-130
XP_002873709 ATHB-3 [Arabidopsis lyrata subsp. lyrata]7754e-080
AAA56906 homeobox protein [Arabidopsis thaliana]7648e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q8LAT0 Homeobox-leucine zipper protein ATHB-2012546e-137
Q00466 Homeobox-leucine zipper protein HAT77635e-080
Q8LC03 Homeobox-leucine zipper protein ATHB-135144e-051
A2XD08 Homeobox-leucine zipper protein HOX214812e-047
Q8S7W9 Homeobox-leucine zipper protein HOX214812e-047

TrEMBL top hits (Blast detail)Scoree value
B5RID5 At5g151507638e-079
C0SVP8 Putative uncharacterized protein At5g15150 (Fragment)7638e-079
A9PL22 Homeobox protein7314e-075
B9IJW4 Predicted protein6113e-061
B9RUQ2 Homeobox protein, putative6095e-061

Arabidopsis top hits (Blast detail)Scoree value
AT3G01220.1 ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20); DNA binding / transcription factor12554e-138
AT5G15150.1 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3); DNA binding / sequence-specific DNA binding / transcription factor7643e-081
AT1G69780.1 ATHB13; DNA binding / sequence-specific DNA binding / transcription factor5143e-052
AT1G26960.1 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23); DNA binding / transcription factor4014e-039
AT2G22430.1 ATHB6; DNA binding / protein binding / sequence-specific DNA binding / transcription activator/ transcription factor3673e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  60%
 
121  20%
 
61  20%

Unigene MembersMember information