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Information for unigene UN11349
| FASTA Sequence |
| Unigene ID: UN11349 | Length: 1752 |
SSR | | AGGCCTTTGCTCACGCGTATGAGTTGGCCGGAGAGTGTGCTGATGATGATGATGATAAGTTGGCGATTTCTAACTTGAGGAAAAGC
GTCATGGATGATTTGAAAATGCACGACTCCTTTGTTCAGGATTGGGATTTAGACATTAACAAAGAAGTAAGTGTTAACTCAGCAAC
TTTGAGATACACCGAGTTCTTATTAGCTACAGCATCCGGAAAAGTAGAAGGACTCAAAGCTCCCGGCATGCTTGATACTCCATTTG
AGAAAACGAAAGTGGCCGCCTACACGCTTGGTGCTGTGACACCTTGCATGAAGTTGTATGCCTTTCTTGGTAAGGAGTTTGGAGCG
CTTCTAGATTCGAGTGAAATGAACCATCCCTACAAGAAATGGATCGAAAATTATTCTAGTGAAGCTTTCCAGGCATCAGCTAAGCA
AACTGAAGACTTGCTCGAGAAGCTTAGTGTCTGTATGACTGGGGAAGAGCTGGACATCATTGAAAACTTGTATCAACAGGCAATGA
AGCTTGAAGTAGAGTTCTTCCATGCCCAACCGTTAGCTCAGCCTACCATAGTTCCGCTGCTGAAGAACCATTCAAAAGATGATCTC
ATGATATTTTCTGATTTTGATCTGACTTGCACCGTTGTTGATTCTTCTGCTATTTTAGCCGAAATTGCAATCGTAACTGCCCCGAA
AGATGACCAGGGTCAACAAGTGAATCGGATGCTCTCGGCTGACCTGAAGCACACCTGGAGTCTACTTTCTAAACAGTATACAGAGC
ATTATGAAGAGTGCATAGAGAGTATTCTGAATAAGGAAAAAGCGGACAAGTTTGACTACGAGGGTTTATGTGAAGCACTAGAGCAG
CTGTCAGAGTTTGAGAAAAAGGCAAACGATCGAGTGATCGAGTCTGGTGTACTCAAGGGCCTGAATCTCGATGACATCAAGCGAGT
TGGGGAAAGGTTAATTCTTCAAGATGGCTGCATCAGTGTCTTCCAGAAAATTTTGAAGACTCAGGATGTGAATGCAAAACTCCACG
TGCTTTCGTATTGTTGGTGTGGTGACCTCATCAGAGCAGCCTTTTCTGCACGGGGAGTAGATGCAGTGGAAGTACATGCAAATGAA
TTCACGTTCGAGGAATCTATCTCTACTGGAGAAATTGAACGAAAAGTGGAATCCCCAATCGACAAGGCTCAGCAGTTTAAGAGCAT
TCTAGAAAACAGAAAGAAGGAGGATAAAGGCATCCTTACTGTTTACATTGGAGATTCAGTAGGTGACTTGCTCTGTCTCCTGGAAG
CAGACATAGGAATAGTGGTTGCCTCTAGCTCGAGCCTCAGGAGAGTGGGAAGCCATTTCGGGGTCTCATTTGTGCCTTTGTTCTCT
GGAATTGTGCAAAAACAGAAACAAGAAGAAACCTGGAAGGGACTTTCTGGCACACTTTACACGGTATCAAGCTGGGCTGAAATACA
TTCCTTCGCTCTTGGATGGGAGTAAACGGCAGAAGAAATATATGATTGAAGTTTGTATATACTGCCGGGGGTGGCTAGTTTTTATC
AAGGGCCACGTATAAGTTTCAGTCTTTCCCTTTGAAAGTTGTGACATGATGAACTTTGGTAAGTCTCGTCTTAGAATCTATGAGCT
TCTGTTGCTTTGTTGCAATGATCTCTTGGCTTTTGACAGAAAAGATGTGATGCAGAGATGTCATTTGATGATATGCATATACAATA
AAACATTTATACATAATTCTTGAAGGGCAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAF00660 hypothetical protein [Arabidopsis thaliana] | 2168 | 2e-241 |
| NP_198287 heme oxygenase-like, multi-helical protein [Arabidopsis thaliana] | 2168 | 2e-241 |
| XP_002870398 hypothetical protein ARALYDRAFT_915614 [Arabidopsis lyrata subsp. lyrata] | 2142 | 2e-238 |
| XP_002270291 PREDICTED: hypothetical protein [Vitis vinifera] | 1833 | 2e-202 |
| CBI36504 unnamed protein product [Vitis vinifera] | 1833 | 2e-202 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WQD9 Putative uncharacterized protein At5g32470 (Fragment) | 2168 | 1e-241 |
| Q3E8S5 Putative uncharacterized protein At5g32470.1 | 2168 | 1e-241 |
| A9PFH4 Putative uncharacterized protein | 1812 | 3e-200 |
| B9I5R3 Predicted protein | 1780 | 1e-196 |
| Q0J3L2 Os08g0566000 protein | 1503 | 2e-164 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G32470.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 1039 Blast hits to 1039 proteins in 384 species: Archae - 43; Bacteria - 698; Metazoa - 2; Fungi - 110; Plants - 26; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). | 2293 | 3e-258 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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