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Information for unigene UN11366

FASTA Sequence
Unigene ID: UN11366Length: 1326 SSR 
AGGAGAATCACAATAAAGGCTCTTCTGCATTTACATCTCAGGCCACCTCCTCGTGGATCCAGTCTCTATCATCGTACCCAAAGTAG
GCACCTTTCATCCTCCTCTTCAATGGCCGATCTCAAGTCAACCTTCCTCAACGTCTACTCCACCCTCAAATCCGACCTCCTCCACG
ACCCTTCCTTCGAATTCACCGATGAATCACGTCTCTGGGTCGAAAAGGTACACTCTTTTCAGATTCTTCTCAGATCCGTATCGTGA
TTCTCTCTCTCTCTCTTTCTTTCTTTATTTGCCAGATGTTGGATTACAATGTACCGGGAGGGAAGCTGAATCGTGGTCTCTCTGTC
GTGGACAGCTTCAAGCTTTTGAAGGAAGGTGAAGATTTGACCGAGGAAGAGGTTTTCCTCTCGTGTGCTCTTGGTTGGTGCATCGA
ATGGCTTCAAGCTTATTTCCTTGTGCTTGATGACATTATGGATAACTCTGTCACTCGACGTGGACAACCTTGCTGGTTCAGAGTTC
CTCAGGTTGGTATGGTTGCCATCAACGATGGGATCTTACTTCGCAATCACATCCACAGGATCCTCAAGAAGCACTTCAGGGGAAAG
CCTTACTATGTTGACCTCGTTGATCTCTTTAATGAGGTAGAGATGCAAACAGCTTGCGGCCAGATGATTGATCTGATCACCACCTT
CGAAGGCGAAAAGGATTTGGCCAAGTACTCATTGCCAATCCACCGGCGTATTGTCCAATACAAAACTGCTTATTACTCATTTTATC
TCCCTGTTGCTTGTGCGTTACTTATGGCTGGCGAGAACTTGGAAAACCATATTGATGTGAAGAATGTTCTTGTTGACATGGGAATC
TACTTCCAAGTGCAGGATGATTATCTGGATTGTTTTGCTGACCCAGAGGCACTTGGCAAGATAGGAACGGATATAGAAGACTTCAA
ATGCTCCTGGTTGGTGGTAAAGGCATTGGAACGCTGCAGCAAAGCACAAACTGAGATATTATATGAAAACTACGGTAAACCCGACC
CATCAAACGTTGCTAAAGTGAAGGAGCTTTACAAAGAGCTTGACCTTGAGGGAGTGTTCAAGGAGTATGAGAGCAAAAGCTACGAG
AAGCTGACTGGAGTGATTAGGCTCACAAAAGTAAAGCAATCCAAGCAGTGCTCAAATCCTTCTTGGCTAAGATCTACAAGAGGCAG
AAGTAGTCAGTCTTAAGCCTTCCCAGATTATGTCTTTGATTCTTCTTTGATGATTTGTGTAATTCTGTTAAGTGCTTTCATTTCTT
AAACTAAAAAGTTATCATTTCCACTTTTATCTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199588 farnesyl diphosphate synthase 1 [Arabidopsis thaliana]14243e-155
AAB07264 farnesyl diphosphate synthase short form [Arabidopsis thaliana]14243e-155
XP_002863368 farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp. lyrata]14153e-154
CAA53433 dimethylallyltransferase [Arabidopsis thaliana]14082e-153
XP_002868080 hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp. lyrata]13518e-147

Swiss-Prot top hits (Blast detail)Scoree value
Q09152 Farnesyl pyrophosphate synthase 1, mitochondrial14241e-156
Q43315 Farnesyl pyrophosphate synthase 213452e-147
P49351 Farnesyl pyrophosphate synthase 112511e-136
P49352 Farnesyl pyrophosphate synthase 212449e-136
O24242 Farnesyl pyrophosphate synthase 211821e-128

TrEMBL top hits (Blast detail)Scoree value
Q94F74 Farnesyl diphosphate synthase12441e-134
C0LSI7 Farnesyl diphosphate synthase12413e-134
Q8RVK7 Farnesyl pyrophosphate synthase12413e-134
D3K2X4 Farnesyl pyrophosphate synthase12379e-134
Q8L7F4 Farnesyl diphosphate synthase12361e-133

Arabidopsis top hits (Blast detail)Scoree value
AT5G47770.1 FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase14241e-157
AT4G17190.1 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase13452e-148
AT4G17190.2 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase10621e-115

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  25%
 
61  25%
 
211  25%
 
71  25%

Unigene MembersMember information