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Information for unigene UN11383
| FASTA Sequence |
| Unigene ID: UN11383 | Length: 1103 |
SSR | | GGCACGCTAACACACACACACATCGCCGCAGGGCCATTTCCATCTCTCTCTCGCAACTCAAACTTCCAACAATGGCTGAACGTGGT
GGAGAACGAGGCGCCGAGCGAGGAGGAGACCGCGGAGGTTTCGGACGCGGCTTCGGAGGAGGTCGTGGCGACAGAGGCGGCCGCGG
AGGTCCTCGTGGACGCGGAGGAAGACGCGGAGGACGTCCCGCCGAGGAGGAGAAGTGGGCCCCAGTGACCAAGCTCGGCCGTCTCG
TGAAAGACGGAAAGATCCAGAAGCTCGAGCAGATCTACCTCCACTCCCTCCCCGTCAAGGAGTACCAGATCATCGACCTCCTCGTC
GGTCCCACTTTAAAAGACGAGGTGATGAAGATCATGCCTGTCCAGAAACAGACAAGAGCCGGGCAGAGGACGAGGTTCAAGGCCTT
TGTCGTTGTCGGAGACGCGAACGGCCACGTGGGGTTGGGTGTGAAGTGCTCCAAGGAGGTGGCGACGGCTATTAGAGGTGGGATTA
TATTGGCGAAGCTGTCTGTGATTCCGGTGAGGAGAGGGTACTGGGGGAACAAGATTGGGAAGCCTCACACTGTTCCTTGCAAGGTT
ACGGGGAAGTGTGGGTCCGTTACGGTGAGGATGGTGCCTGCTCCGAGAGGTGCTGGGATTGTGGCGGCTAGGGTTCCTAAGAAGGT
GCTTCAGTTTGCTGGGATTGATGACGTGTTCACTTCCTCCAGGGGGTCTACCAAGACTCTTGGAAACTTCGTAAAGGCTACATTTG
ATTGCCTCCAGAAGACTTATGGATTCTTGACACCAGAGTTCTGGAAAGAGACGAGCTTTAAGAAATCACCATACCAAGAGTACACT
GATTTGCTCGCCAGTAAGGGAACTACGACCAAAGTCATCACCGAGGTCGAAGACCAAGCCTCCTAAACATAACAAACAAACAGTGT
CCCCCCTTGTTTTGTTTTTGGATCATCATCCTTTCTTGAGTTTATTTTGTTCGAACCTTTAGTATATGTTGTTTCTGGATTGCATC
TTTTACATTCCATCATCTTCCCAAACAAGTTACTTGGCTCTAGTTTTTTGATAATGGATGGTTTATGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881803 40S ribosomal protein S2 [Arabidopsis lyrata subsp. lyrata] | 1305 | 1e-141 |
| AEM36341 At1g58380 [Arabidopsis thaliana] | 1296 | 1e-140 |
| NP_564737 40S ribosomal protein S2-2 [Arabidopsis thaliana] | 1292 | 4e-140 |
| XP_002886684 hypothetical protein ARALYDRAFT_475376 [Arabidopsis lyrata subsp. lyrata] | 1292 | 4e-140 |
| NP_176134 40S ribosomal protein S2-1 [Arabidopsis thaliana] | 1291 | 6e-140 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93VB8 40S ribosomal protein S2-2 | 1292 | 2e-141 |
| Q8L8Y0 40S ribosomal protein S2-1 | 1291 | 2e-141 |
| P49688 40S ribosomal protein S2-3 | 1285 | 1e-140 |
| Q9SCM3 40S ribosomal protein S2-4 | 1217 | 9e-133 |
| P15880 40S ribosomal protein S2 | 999 | 2e-107 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B5BRD8 40S ribosomal protein S2 | 1292 | 3e-140 |
| Q8LDY5 40S ribosomal protein S2 | 1278 | 1e-138 |
| B9II72 Predicted protein | 1184 | 1e-127 |
| A9PDI4 Predicted protein | 1172 | 2e-126 |
| A9RHM6 Predicted protein | 1155 | 2e-124 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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