 |
Information for unigene UN11394
| FASTA Sequence |
| Unigene ID: UN11394 | Length: 1060 |
SSR | | CACGAATCTTTTCTCTCTCTCTCCCCCCCCTTGTTCCCTCTTTTTAGATGGAATGATGAATCCATGCTTGCAGAGGTTTTTAAAAT
TTGATCAATATTTGAAGAAACAGTTCATAAGAATAAGAAGAAGAAGAGAGATATATATATATGGAGGTGGAGAAGAGAATAATGGT
CAATGGAGGCATGAAACTACCAGTTGGATACAGATTTCACCCAACGGAGCAGGAGCTTATCCTTCATTACTTGCTCCCAAAGGCTC
TTGCTTCTCGTTTGCCTTCTTCCATCATCCCTGTCTTTGACGTTTTCTTCTCTCATCCTCTCACTTTTCCAGGGGATCAAGAGGAG
AGGCAGAGGTACTTCTTTTGCAAGAAGAAACAAGAAGTTTCAGGTAATGCACACAGAATCAAGACTTCATCTGGTGATGGTTATTG
GAAAGCTATTAGGAAAGAAAGAGAAGTCATTGCTCGTGGTAGAACAGTTGGGATTAGAAGAACACTTGTTTTCTATGGAACAAACA
ACTCTTCGGCTAACTGCAACAAAACCAGATGGTGCATGACAGAGTATTCCCTTGCCGGTTTTGCATCAACTAAAGTGTTTGGAGAA
TGGGCAGTGTACAAAGTGTATAAGAGGAAAGAATCAAAAGGAAGAAGGCAGAGGATATCAGAAGGGAGAGATCATGAAGAAGAAGA
CTTGAATTGCATCCACTTTACTATTGGGACTGATCATGAAACCTGTCCTCCCCCGCCCTCTCCTCCTACCTCAGCTGATGAGTCAG
GGATCATTATTTAGACGTTGTTCCTTAACCCTAACCTGCTCCACTTACGTTTCTGTCACGTCTTGATTCATTTGTTAGAGAAACAA
GTAAAAGGAGGCTAGAGGGGGTTCAAATTTTATCAGAAAGTGTTGTGTGAGTGGAGATTTGTTGAACAAACCACATATATGTCAAA
CTTGTTAACTTTTACTTGAAGTTGTTCTAACATTATCGGAGTTAAAAGTGACATAGCCGTGTAAGAGGAAGTAAAGTTGAACTGAA
AGGAAAAAGATGTATTCTTGGGTGAGAT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871595 ANAC084 [Arabidopsis lyrata subsp. lyrata] | 853 | 3e-089 |
| NP_568292 NAC domain containing protein 84 [Arabidopsis thaliana] | 844 | 4e-088 |
| AAM60818 unknown [Arabidopsis thaliana] | 792 | 4e-082 |
| XP_002273649 PREDICTED: hypothetical protein [Vitis vinifera] | 356 | 1e-031 |
| XP_002512886 transcription factor, putative [Ricinus communis] | 353 | 3e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7EZT1 NAC domain-containing protein 67 | 238 | 3e-019 |
| O49255 NAC domain-containing protein 29 | 221 | 3e-017 |
| Q39013 NAC domain-containing protein 2 | 221 | 3e-017 |
| Q93VY3 NAC domain-containing protein 72 | 216 | 1e-016 |
| O04017 Protein CUP-SHAPED COTYLEDON 2 | 215 | 1e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFX5 At5g14000 | 844 | 2e-088 |
| Q8LGK7 Putative uncharacterized protein | 792 | 3e-082 |
| A5AMY1 Putative uncharacterized protein | 356 | 1e-031 |
| B9RH27 Transcription factor, putative | 353 | 2e-031 |
| B9GF72 NAC domain protein, IPR003441 (Fragment) | 333 | 4e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G14000.1 anac084 (Arabidopsis NAC domain containing protein 84); transcription factor | 849 | 4e-091 |
| AT2G33480.1 ANAC041 (Arabidopsis NAC domain containing protein 41); transcription factor | 285 | 9e-026 |
| AT2G33480.2 ANAC041 (Arabidopsis NAC domain containing protein 41); transcription factor | 279 | 5e-025 |
| AT5G13180.1 ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83); transcription factor | 273 | 2e-024 |
| AT3G04070.2 anac047 (Arabidopsis NAC domain containing protein 47); transcription factor | 226 | 6e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
