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Information for unigene UN11402
| FASTA Sequence |
| Unigene ID: UN11402 | Length: 894 |
SSR | | GGGCCGTTTCCTTCTCTCCGTCTTCTTCTTCTTCTCAGGTCTCGTGAAGAAGAATTAGGGTTTTGAACAAGAGATGTGGTTTCTAT
GTGTCTTCTACCACAGGCTACTAGACTTCAGAAAGCCAGAGGTCGAAGCTTTAGCCGAACTCTTCGGAGAAGATGAGTCTCTTCTC
CAATGGCGTCTCCCTGAACATCACCATAACGACACTCCATTCCACTTCGTCCACCTTTCTTCCGAAGAAATCGCTCAAAACATCGC
CAAGCGAAGCATATTGGTGAAAGGAATGTACGAGCTTTGGGGCGAAGGAGCTTCCTACGAAGAGCTTAAAGACTCCATTCAAAGCT
TCCCTGACTCTCGCAAGCTCCCGTTTCTTGATTCTGATTCCACCTTTAGAATCTCCGTCGAAACTTTCGGAAAGGCTCTGACTTTC
GATGAGCAGAGGGAGAGAATCAACTCCCTTACTTACATCCCCTTCGAGGGAAAGGTTAACTTGAAGAAGCCGGATCATAAGTTTTT
TATAATAGAGATGGATGAGTCTGAAGAGAACAATGGACTTCAACCCATTCTCCAGAGAAGAATCTTCTTTGGGAGGGAGGTTGGTT
TTGCCGATAGGAAGCTGTTACCTACTTTTCAGCTCAAGTCTCGGACTTACCTTGGCCCGACCGCTATGGACGCTGAGATGGCTTTC
TTGATGGCTAATCAAGCGAAAGCTACCTCTGGAAAGCTTGTGTATGATCCTTTTGTTGGCACTGGGAGCATTCTTGTCTCTGCTGC
ACGTTTTGGTGCAATGACAATGGGTGCAGATATTGATATCAGAGTAGTGCGTGATGGACGTGGTCCAGACTGTAATTTGGAGCAAT
TTCAAGCAGTATGGACTACCTATGCCAGTTGCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876970 methyltransferase/ nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata] | 1245 | 9e-135 |
| NP_566792 methyltransferase / nucleic acid binding protein [Arabidopsis thaliana] | 1243 | 1e-134 |
| CAN78018 hypothetical protein VITISV_002923 [Vitis vinifera] | 1082 | 7e-116 |
| XP_002271199 PREDICTED: hypothetical protein [Vitis vinifera] | 1082 | 7e-116 |
| CBI20041 unnamed protein product [Vitis vinifera] | 1082 | 7e-116 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7TNK6 tRNA guanosine-2'-O-methyltransferase TRM11 homolog | 530 | 3e-053 |
| Q7Z4G4 tRNA guanosine-2'-O-methyltransferase TRM11 homolog | 523 | 2e-052 |
| Q05B63 tRNA guanosine-2'-O-methyltransferase TRM11 homolog | 522 | 3e-052 |
| Q5R962 tRNA guanosine-2'-O-methyltransferase TRM11 homolog | 522 | 3e-052 |
| Q9CWH5 tRNA guanosine-2'-O-methyltransferase TRM11 homolog | 520 | 5e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIN4 Genomic DNA, chromosome 3, BAC clone:F20C19 | 1243 | 1e-134 |
| A5AKU7 Putative uncharacterized protein | 1082 | 5e-116 |
| B9T8H4 DNA binding protein, putative | 1054 | 8e-113 |
| C5XUT0 Putative uncharacterized protein Sb04g022710 | 979 | 4e-104 |
| A9PFK0 Predicted protein | 976 | 9e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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