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Information for unigene UN11446

FASTA Sequence
Unigene ID: UN11446Length: 1138 SSR 
GGACAGAAAAAAAAATCAAGTCTGTATTTGTTCAATCTATCTCTTCACAGCCTCTCCTCCTCCTCCTCCAAAACTTGGCTGATCTC
TCTCACTAAATCGCGGATCAACCATGAGCAAAGGTCCAGGAATGTTCTCGGATATCGGCAAAAAAGCCAAAGATCTGTTGACGAGA
GACTACACCTCCGATCACAAGTTCAGTATCTCCACTTACAGTGCCTCCGGCGTGGCACTTACGTCTACTGCTCTCAAGAAAGGAGG
CGTGCATGCTGCTGATGTTGCCACTCAATACAAATACAAGAATGCTGTCTTCGATGTCAAAGTCGACACTGATTCTACTATTTTGA
CAACTGTCACTTTCACTGAGATCCTCCCTTCGACCAAAGCCATCGTCTCCTTCAAAGTCCCTGACAACAGTTCTGGCAAGCTCGAG
GTCCAGTACTTCCACGACCACGCCACTGTTACCGCTGCTGCAGCTTTGAAGCAGAACCCGTTGATCGACATAACAGCCACTCTAGG
CACACCAGTCATCTCCTTTGGTGCTGAAGCTGGATACGACACCTCCTCCAAAACTTTCACCAAGTACAACGCTGGAATCAGCGTGA
CCAAACCAGATGCTTCCGCTTCCATTATATTGGGAGACAAAGGAGACTCAATCAAAGCATCTTACCTTCATCACCTCGACGAATCC
AAGAGAAGTGCTGCAGTTGGTGAGGTTTACAGGAAATTCTCGACTAATGAGAACACGATAACTGTTGGTGGGTCATACGCGATTGA
TCCCTCGACTTCGGTGAAAGCTAAATTCAACAGCCGTGGCACCCTCGGTGCTCTTCTGCAGCACGAGGTCTTGCCCAAATCACTAG
TGACTGTTTCCAGTGAGATCGACACTAGGGCGTTGGACAAGCATCCAAGGTTTGGTCTTTCACTTGCTCTCAAACCTTGAGAGAAC
ACACACACACGCAACACATGAGATGAGTCTCCGTACCATTCTTCTGTTCTCTCATTTGTTGAATTTTACGACAGGATCCGTGGGTT
TACTTTCCACATGAATAAGTAGTTCGGACGCAGTGAAATTGACGGATAATTCTTTTACGAATATGGTTCTTCTTATTGACATTTTC
AAAAGTAATTTTCTTGGTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAW22622 porin-like protein [Brassica napus]12737e-138
NP_201551 voltage dependent anion channel 2 [Arabidopsis thaliana]12541e-135
XP_002866701 hypothetical protein ARALYDRAFT_496845 [Arabidopsis lyrata subsp. lyrata]12522e-135
XP_002877711 hypothetical protein ARALYDRAFT_323570 [Arabidopsis lyrata subsp. lyrata]11733e-126
AAQ87022 VDAC2.1 [Lotus japonicus]10783e-115

Swiss-Prot top hits (Blast detail)Scoree value
P42055 Mitochondrial outer membrane protein porin of 34 kDa7536e-079
P42056 Mitochondrial outer membrane protein porin of 36 kDa7312e-076
P42054 Outer plastidial membrane protein porin7222e-075
Q9SRH5 Mitochondrial outer membrane protein porin 17062e-073
Q9SMX3 Mitochondrial outer membrane protein porin 26991e-072

TrEMBL top hits (Blast detail)Scoree value
Q5MD14 Porin-like protein12735e-138
Q9FJX3 At5g6750012548e-136
Q6W2J2 VDAC2.110782e-115
B9H6N6 Porin/voltage-dependent anion-selective channel protein10755e-115
A5AQ65 Putative uncharacterized protein10674e-114

Arabidopsis top hits (Blast detail)Scoree value
AT5G67500.1 VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2); voltage-gated anion channel12553e-138
AT3G01280.1 VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1); voltage-gated anion channel7071e-074
AT5G15090.1 VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3); voltage-gated anion channel7008e-074
AT5G57490.1 VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel6659e-070
AT3G49920.1 VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5); voltage-gated anion channel5001e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  14%
 
123  43%
 
211  14%
 
201  14%
 
61  14%

Unigene MembersMember information