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Information for unigene UN11452
| FASTA Sequence |
| Unigene ID: UN11452 | Length: 906 |
SSR | | GGACATTACATCTGATAGAAGAAGAGCTCCGATCGCCAAAAGATGAGCTTGATCCTCAGATTCAGACAACACTTATCAGACAAGCT
ATCTCCACCACTCGCCTCTCTCATCGCCTGTCGCCGGAGCTTCGGACAACCGGCGAGAAAACAAGATGAAGAGGAGGAAGAAGAAG
TAGAAATAGACCAGAGGAAGCTCCCGACCGACTACGATCCCGCCACATTCGATCCGACGGAACACCGAAGTCCGCCGACGGACCGA
GTGTTCCGCCTCGTCGACGAGATCTCGTCTCTGACACTGTCGGAAATCTCAGAGCTCGGCGCGATTATAATGAAGAAGAGAGGCAT
CACGGAGATACCAACCGTCGCCGTTATGAAACCCGGAGCTGTAGGTGGTGGTATCGCTCAGGGTCAAACCGGTGGTGGTGGTGGTG
GTGGTGCGAGTGAGGAAGCGAAAGTGGAGAAGACTGTGTTTGAGGTCAAGCTTGAAGGGTTTGAAGCGTCTGGGAAGATCAAGATT
ATTAAAGAGGTGAGGAGCTTTACTGATTTGGGGCTTAAGGAAGCGAAGGAGTTGGTGGAGAAGACTCCTTCGGTTTTGAAAGCTGG
TGTTTCTAAGGAAGAAGGTGAGAAGATTGTTGAGAAGCTTAAGGCTCTTGGTGCTAAAGTTGTTCTCGAGTGATTGATTCAAAAAG
CAAGGTTTTTCGATTTTATTTTTCTTTTGGTTCCGTCTTGATATGAGCTAATAATGTAATAGATTAAACTTAAAAGCAGCTTTGTC
TCATTGCTATAATTGGTGGTTTTTGAGAGATGATCAAGCACATCAATGTTTGGGAACCGTTGTGTTGTAGTTTAGTGTTGTTTTTT
GTGGCTTTGGTATTGGCTTTAGTTTGAAGCATATTGGTTTTGTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887286 hypothetical protein ARALYDRAFT_476144 [Arabidopsis lyrata subsp. lyrata] | 767 | 2e-079 |
| NP_564986 ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] | 764 | 5e-079 |
| XP_002304265 predicted protein [Populus trichocarpa] | 656 | 2e-066 |
| XP_002533422 50S ribosomal protein L7/L12, putative [Ricinus communis] | 650 | 9e-066 |
| ACU23946 unknown [Glycine max] | 632 | 1e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P53163 54S ribosomal protein L12, mitochondrial | 254 | 3e-021 |
| A9BDG4 50S ribosomal protein L7/L12 | 231 | 2e-018 |
| P41189 50S ribosomal protein L7/L12 | 225 | 8e-018 |
| Q46HH2 50S ribosomal protein L7/L12 | 219 | 4e-017 |
| A2C031 50S ribosomal protein L7/L12 | 216 | 8e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O04527 F20P5.9 protein | 764 | 4e-079 |
| B9GY19 Predicted protein | 656 | 1e-066 |
| B9T5A3 50S ribosomal protein L7/L12, putative | 650 | 6e-066 |
| C6TM04 Putative uncharacterized protein | 632 | 7e-064 |
| Q0KIV9 Ribosomal protein L7/L12 C-terminal domain containing protein | 511 | 8e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G70190.1 ribosomal protein L12 family protein | 765 | 2e-081 |
| AT4G36420.1 ribosomal protein L12 family protein | 348 | 4e-033 |
| AT2G03130.1 ribosomal protein L12 family protein | 284 | 1e-025 |
| AT4G37660.1 ribosomal protein L12 family protein | 279 | 4e-025 |
| AT3G06040.1 ribosomal protein L12 family protein | 256 | 2e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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