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Information for unigene UN11473

FASTA Sequence
Unigene ID: UN11473Length: 778 SSR 
CTCTAAACCTTTCACTACAGTTCTTATCTATTTTCCTTCAATGGCTACAGTCGCAGAGGCTGCTCCAGCTAAGAAATCGAGGAACA
GCAGAAAAGCATTGAAGCAGAAGAATGAGATCGCGGAGTCACCGTTGTTGTTATCATCGCCAGCAAAGGGGAAAGAAACGAAGAAG
TCATACGAGAAAGACCTGATGGAGATGCAGGCGATGTTGGAGAAAATGAAGATCGAGAAGGAGAAGACGGAGGATCTGCTGAAGGA
GAAGGACGAGATCCTGAGGAAGAAGGAGGAGGAACTCGAGACGAGGGACGTGGAACAGGAGAAGCTTAAGGTGGAGCTAAAGAAGC
TTCGAAAGATGAAAGAGTTCAAGCCTACCATGACTTTTGCTTTCGGTCAATCTTTGGCACAAACTGAAGACGACAAGAAGGGGAAG
AAGAAGAAGAAGAAGGAGTGTCCTGAGACGAAGAGACCTTCCACGCCGTACATCTTGTGGTGCAAGGATAACTGGAACGAAGTGAA
GAAGGAGAACCCAGACTCTGACTTCAAGGAGACTTCGAACATTCTCGGTGCTAAGTGGAAGACTCTGAGTGCAGAAGAGAAGAAGC
CTTACGAGGAGAAGTACAAGGCTGATAAGGAAGCTTACCTCCAGGTTATTACAAAGGAGAAGCGAGAGAGGGAAGCCATGAAGCTA
CTTGAAGATGAGCAGAAGCAGAAGACTGCTATGGAGCTGCTTGATCAGTATCTCCACTTTGTTCAAGAAGCTGAACAAGACAACAA
GAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAS79547 At4g11080 [Arabidopsis thaliana]10046e-107
AAC35540 contains similarity to HMG (high mobility group) box (Pfam: HMG_box.hmm, scores: 70.67, 53.09 and 80.15) [Arabidopsis thaliana]9957e-106
NP_192846 HMG (high mobility group) box protein [Arabidopsis thaliana]9832e-104
NP_194111 HMG (high mobility group) box protein [Arabidopsis thaliana]9652e-102
NP_001190816 HMG (high mobility group) box protein [Arabidopsis thaliana]9652e-102

Swiss-Prot top hits (Blast detail)Scoree value
P11633 Non-histone chromosomal protein 6B1745e-012
Q5KEP6 Non-histone chromosomal protein 61673e-011
O04235 FACT complex subunit SSRP11664e-011
Q5B995 Non-histone chromosomal protein 61655e-011
Q05153 FACT complex subunit SSRP11647e-011

TrEMBL top hits (Blast detail)Scoree value
Q700E0 At4g1108010091e-107
O82510 F2P3.3 protein9955e-106
Q9T012 98b like protein9831e-104
Q9SUP7 98b like protein9651e-102
B2WS76 High mobility group HMG1/2 family protein9543e-101

Arabidopsis top hits (Blast detail)Scoree value
AT4G11080.1 high mobility group (HMG1/2) family protein9991e-108
AT4G23800.1 high mobility group (HMG1/2) family protein9748e-106
AT3G28730.1 ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor1646e-012
AT5G23420.1 HMGB6; transcription factor1306e-008
AT1G62760.1 invertase/pectin methylesterase inhibitor family protein1208e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information