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Information for unigene UN11493
| FASTA Sequence |
| Unigene ID: UN11493 | Length: 1057 |
| SNP | GGGGATTCACAGAAGATCTCAAATCGAAATCGAAAATCGAAAAAAGATGATCAGAAGAAGAATCTCTTCGATCATTTCATCGTCTC
TCATCAATTCTCCATTTCATCACTCCGCCAAGCCCAGATTCATCGTCTCTTCGCCGCTTCTTCAATGCCGTCGATCTCCGATCCTG
ACTCAAGCTCCTCCTACCTTCGCGGGAAGAAGAGTTCCGTCGTTCGAGGGGATCAGGGCTTACAGTTTGCTGAGCCTGAACGATCT
GAGAGACAATGTGCCGAGAAAGCTGAAGACGAGGAAAGGAAGAGGTATCGGGTCTGGGAAAGGTAAAACGGCGGGGAGAGGTCACA
AGGGGCAGAAGGCGAGAGGGACGATGAAGTTTGGTTTCGAAGGTGGGCAGACTCCTTTACGACGCCGTTTGCCTAAACGTGGCTTC
AAGAACAAGTTTAAGCTCCATTTTCAGCCGGTTGGTTTGGGGAAGATCGCTAAACTCATAAACGCTGGGGAGATAGATTCACATGA
GTTGATCACGATGAAAACGCTCAAGGATGTGGGAGCTATCGGAAAGCAAATAGAAGACGGAGTGAGACTGATGGGTCGTGGTGCTG
ATGAGATCAAATGGCCACTTCATTTCGAGGTTTCGAGAGTGACAGTTAGGGCCAAGGAGGTGGTGGAAGCAGCAGGAGGATCGGTG
AGAAGAGTGTATTACAACAAATTGGGGTTGAGGGCATTACTTCGACCGGAATGGTTTGAGAAGAAAGAAAGGCTATTGCCAAAAGC
AGCCAGACCACCTCCTAAACAACAAGATAGGGTCGATAGCATCGGACGTCTTCCTGCTCCGAAGAAACCCATCCCTTTCTATGCAG
CTGAGGAAAACAAAGTTGAGTCTCCTGTTGAATCATGATTTCGGTTAGTTTTTTTTAACTTTTGATGTTTTGGTTTAAGTTGTTCG
TGTTGTTTCTTGGTCTTGTTCTTACAAGAACAAAAATTGAGGATGGTCGGTGGACCAAATAATGTCATTCACGTTTTGAATTTTTA
TGGACTTATAAGTTCTTAAGCAAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866628 ribosomal protein L15 family protein [Arabidopsis lyrata subsp. lyrata] | 1323 | 1e-143 |
| NP_201272 ribosomal protein L18e/L15 [Arabidopsis thaliana] | 1305 | 1e-141 |
| XP_002268646 PREDICTED: hypothetical protein [Vitis vinifera] | 1013 | 9e-108 |
| XP_002522195 60S ribosomal protein L10, mitochondrial, putative [Ricinus communis] | 1011 | 2e-107 |
| XP_002298658 predicted protein [Populus trichocarpa] | 998 | 5e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A9H3K5 50S ribosomal protein L15 | 340 | 4e-031 |
| A5FZU6 50S ribosomal protein L15 | 328 | 1e-029 |
| Q5FU02 50S ribosomal protein L15 | 318 | 2e-028 |
| A8GVD3 50S ribosomal protein L15 | 290 | 3e-025 |
| Q1RHP0 50S ribosomal protein L15 | 290 | 3e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FLF3 Genomic DNA, chromosome 5, P1 clone:MUB3 | 1305 | 9e-142 |
| B9S876 60S ribosomal protein L10, mitochondrial, putative | 1011 | 1e-107 |
| B9GFG1 Predicted protein (Fragment) | 998 | 3e-106 |
| B9N3V7 Predicted protein | 989 | 4e-105 |
| B8BBY6 Putative LSU ribosomal protein L15P | 908 | 9e-096 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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