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Information for unigene UN11509
| FASTA Sequence |
| Unigene ID: UN11509 | Length: 2225 |
SSR | | GGACCGACGTGTGTGTCCGAGATTCACTTCCTCTCTCATCCTCTTCTGATCCCGCCGCCACAAAACCTCCTACCTCTCCGCCTATA
GCTGTTAACTGTTATAAAGCCCGGTAACAAGCAGCTGAGGAATAAGAAGACGTCCTGATGATGATGATGACTTCACTCGGTATGGA
TGGTGGTGGTGGCGGTGGTGGAGGAGGAGGGAGATTTATGACGTATCCGCCGCCTCTTTCCGTGCCTCCGTCGGCTCCTCAGTCAC
CTAACTTCTCTGGTGGTCTCCGATCACAACCTTCTTTCCTCGTTGAGCAAGAAAAGTATCTTTCTGAATTACTTGCAGAGCGCCAC
AAGCTTACTCCCTTCTTGCCTGTGCTCCCACATGTCTTCCGTCTGATGAATCAAGAGATCTCTTTCATCATCTCCAGCACCAAATT
GGCTAAACTCTCCTGGTAGCTCGTCCGGTCTCATTGTAAAACGATCAATCAGGGTGGATATTCCAGTCGACAAGTATCCAAACTAC
AATTTCGTTGGCCGTCTCTTGGGACCTAGAGGAAACTCCCTAAAACGAGTTGAAGCGAGCTCTGAATGCCGTGTTCTTATCAGGGG
GAGAGGCAGCATTAAAGACCCAGTCAAGGAGGAAATGATGAGAGGGAAACCAGGGTATGAGCACCTGAATGAACAGCTCCACATCT
TAGTGGAGGCAGAGTTGCCCATTGAGATAGTGGATGCACGTCTCATGCAAGTTCGTGAAATCCTAGCCGATCTACTTACTCCAGTG
GAGGAGACGCATGATTTCTACAAGAAACAACAGCTAAGGGAACTGGCGCTTCTCAACGGTAGTCTTAGAGAAGAAGGTTCTCCATC
TCCAATGTCTGGTTCCGTCTCTCCTTACAATAATAGCCTCGGAGGCATGAAGAGAGCCAAGACAAGGGACTAAACAAAACAAAACT
CATCTCACCCTTTTTCAACAAAGGTATAATTATATATTGCAACGTAACCACACTTCCCTTCTTCAAACAAGAAGGCTTTTGAAGGT
TCCATCTCCATCCCCATCCCCACCTGGCTGCTACCGGTACCCTTCATATATGAGTCTGTGTCTGTTTACTTATGTGTCCCGGAGAG
AGTTCAGATGACAGAACTACAGGAGTCTGTATCTTTGTGTATCTGTCTCCATCCGAGGGTTAGTTTTGGCTTTGCTTTTGTTCTTT
TGGTTCAGTGGAGACTAGTGATAAGCTTTGTTGCTTAATTTTGGGTAAAAACATATAATGTTTTGTGTTTTGGTAATGAATTATTC
TGTTTGCATTAAAACATAAACACATCAACTAGTATAAGTTTGTTACTACTACATTATGCAAACTCATCAAGCCTTGTCATTGTTAT
CGTCGTCATCATCATCATCATCTTCATTCTCATCTATCCCAACCCACTGAGTTAATGCGAACAGGAACTCTTTAAAGTTCACCATT
CCATTTCTGTCCCAGTCCATTTCCTCAAATCTCTTCATTGCAATCCTCCCGGAGGAACGTTCTCCAGATTCATCAATGGCTATGAA
CATCTCCTCGCGGCTCACATGTCCATCCTTGTTCTCGTCTAGGAACACGAACGTGCCCACTAGCGTCTCAAACGTCGGCTCCAGCT
TCGGCATTCCCAGTCTCCATTTCTTTTGGAGAGTGGATGAGTCGTCCTTAAGAAGGTAGACAAGGCAGAGAAGCACAATGAACTCA
GTAAACGCAATCTCCTTATCCTCGTTGATATCACAAGCCTGGAACAAATCATTTATCTCTTCTTCTTCAAACATGATCTCTAGCTT
CCTGAAACAGTTCTTTAGCTCCGAGTGATCTATGGACCCGTTCGAATCCTCATCGAACTCTTGGAAAATGGCTTTGCAGTTTCTTA
GACCCTCGTCGATCTTTGGGAGCTTGAGGATAATACTGTTGAAAGATTTCATTGTGGTGCCTTTCGATGCCCTGCGTTGCACGGCT
TCTTTGATCTTGGCCTCTAGCTTTGTCTCTGGTACCCATTCTTGAGCACCAGATTTCGTCACCGCACCTCCCATGTCTATCTATTA
TGCTTCGATATCAAAATCTGTTTGTAGTTTCTTGTTTGTCACGAAATCAAGAACACGATTATAGAGATCTGTTTGTTGTTTATTGT
TTTCTGTTTACCAGGAGAAAGAAGATTCGATGTTTGAGAAGAAGAATTGATTTGTAATGCCGTGAAGAACGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_194377 putative calcium-binding protein CML21 [Arabidopsis thaliana] | 1025 | 1e-108 |
| XP_002869609 calcium ion binding protein [Arabidopsis lyrata subsp. lyrata] | 1020 | 4e-108 |
| XP_002268527 PREDICTED: hypothetical protein [Vitis vinifera] | 868 | 2e-090 |
| CAA18223 putative protein [Arabidopsis thaliana] | 843 | 1e-087 |
| NP_001078450 putative calcium-binding protein CML21 [Arabidopsis thaliana] | 843 | 1e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q52K82 Probable calcium-binding protein CML21 | 1025 | 4e-110 |
| Q0WLR1 KH domain-containing protein At4g26475 | 797 | 1e-083 |
| Q9FKT4 KH domain-containing protein At5g56140 | 772 | 9e-081 |
| Q8GYR4 KH domain-containing protein At3g08620 | 557 | 8e-056 |
| Q9ZVI3 KH domain-containing protein At2g38610 | 550 | 5e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T3W8 Troponin C, skeletal muscle, putative | 832 | 2e-086 |
| C6THI8 Putative uncharacterized protein | 803 | 4e-083 |
| B9GHJ4 Predicted protein | 735 | 3e-075 |
| B9N5K8 Predicted protein | 734 | 4e-075 |
| A9PGC0 Putative uncharacterized protein | 730 | 1e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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