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Information for unigene UN11516

FASTA Sequence
Unigene ID: UN11516Length: 1117 SSR 
GGATCTTTCTCCTTTTCCGATCGCTTCCCTTAGCTTCCGTCGAGCCTTAGTAATCATCACCTATCGAGAAGATGTTTTCAAACAGT
CAATTCGAGCCCAATTCCGCTTTCTCCGGCGGCGGATTCATGTCCTCTCAACCCACTCAGCCCTACGAATCCTCCTCCTCCTCCTC
CTCCACTACTAAGGGAATAGTTCCAGTGACGGTGAAGCAAATCAACGAATCTTCTCACTCCGGTGGTGAAAAATCCGGTATCGTCA
TCAACGGAATCGAACTCACAAACGTGTCACTCGTTGGGCTAGTGTGTGACAAAGACGTCTCTAAAGTCACTGAAGTTAAGTTCACT
CTTGATGATGGCACTGGTCGCATCGACTGTAAAAGATGGGTGAATGAAAGTTTCGACGCCAGAGAAATGGAGTCAGTTCAAGATGG
AACCTATGTGCGTCTCAATGGTCATTTGAAGACTTTTCAGGGGAATCAGCAGCTTCTTGTTTTCTCTGTCAGACCTATTGTGGATT
TCAACGAGGTGACCTTTCACTATATTGAGTGTATTCACTTCTATTCCAAGAACTCTGAATCACAGTTGGGACAGCAAGTTGGTGAT
GCCACTCAATCCCATACGCTCAACGCAAACCAGGCAACCACATTGAACCCTGTGATTCCCTCTCAAAACAGTGATGGAAATGGGCG
CAAGAACTTGGATGATATGATTCTTGACTATCTAAAGCAACCTGCTTGCACTGCAAGACAACAGGGGATACACCTGGATGAAATTG
CCCAGCAGTTGAAAGTTCCAAAGAACAAGCTTGAGGGTGTTATTCAGTCACTGGAAGGGGATGGCCTTATATACTCAACTATCGAT
GAGTATCACTTCAAGCATGTCGAGCTCTGATCATCAGTAGGGAAGAGTCGGTTGAATTTTCTTTTCATCTAGTATCATTCTGCAAT
TACTTTAGCTTATGTGCTTGCTTAAACTAAAAATGGATTGATTTTCCTAATGATGTTCTTGGTTTAGTTTTCCATTTTCTTTGTAG
TTCCATATTCTCTAGCCTGCATTATGTTTGCTATTAGTGGTTTAGAATTTCGGCTTCAGCCATATCATATAATAGTTTGCATACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880588 ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp. lyrata]11966e-129
NP_565571 replicon protein A2 [Arabidopsis thaliana]11733e-126
XP_002268721 PREDICTED: hypothetical protein [Vitis vinifera]6941e-070
XP_002282796 PREDICTED: hypothetical protein [Vitis vinifera]6761e-068
ACU17707 unknown [Glycine max]6634e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q92373 Replication factor A protein 21863e-013

TrEMBL top hits (Blast detail)Scoree value
Q9ZQ19 DNA replication protein A2 subunit11732e-126
C6T7A5 Putative uncharacterized protein6633e-067
Q4LAW1 Putative replication factor A (Fragment)6292e-063
B9N6A5 Predicted protein6249e-063
Q7XZT4 RPA 32kDa6061e-060

Arabidopsis top hits (Blast detail)Scoree value
AT2G24490.1 RPA2 (REPLICON PROTEIN A2); protein binding11748e-129
AT2G24490.2 RPA2 (REPLICON PROTEIN A2); protein binding11748e-129
AT3G02920.1 replication protein-related4775e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  33%
 
121  33%
 
61  33%

Unigene MembersMember information