Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN11517

FASTA Sequence
Unigene ID: UN11517Length: 964 SSR 
GGGCCCTGTTGCTCCTCTAGAAAGGAAACATGCCTCTCTTCCCAGATCAACAGTTATACACTCAACCACAGTTGCACGAGGAGGAC
AACCGAAATTTATGAACAACACAAACACATTGAGCCCTGAGACTACTCAAAACATTCCTCTTAATCATCATCATGCTGCAGCAGTA
CAAGCACAGCAAAGAAACCTCTCAGCTGCAAAACCAAGCACATTCATGGGTCCAGTGGCGCCTTTTGACAACGGTAGGACCAGTAG
AGACGCATATGACCCGAGATCATTCATCCGCAGCACTACCAGTACTACTCTTCCCTTTCAACAGCAGTCTGCATCAACAGTCTCCA
TGGGAAGGCAACAAGAGAGGAGAACAACAACAACAACCATGGAGTCTGAGAAGCAGGCAAGACAAATACATCAGTACAATAGATAC
GTCGCACCAGATGTAGCCATCAACATAGATAGCAACCCGTTTGTCATGTCTCGAACCACTGGAATGATGCACAAGGCGGAAAACAT
GAGTGTTGATCACCGGATCATAATCGATACGAATCTGTTACAGGCGACAGCAGGAATAGGAGTTGCTGCGGCGGCTGCGGCAGCCG
CTCCCGGTGGTTCTGCTCACCGGAAAGTTGGAGCTGTTCGGTACGGCATGTCAAAGATGTACTAGAAGTCTTAGATCACACAGGAA
CATCGTTCTGATTTTTCTCACGTCTAAAAAGAACCGACGGCTACAGAGGATGTATCAGCGTGGACTGTGGGTGCTAATGATGATGG
ATGTTTCATGGCAGCAACCGATGCATGTGGTAGTGGGAGCCCATTTCACAGAGAACTTTGTTCTTCCAAAGTCAAAGAAAGCTGCT
TTGTCACTTGATTGTATCTGTAGCCAAACAATTGGTGTGTATGTATATATTTTGTTGTATAGAATCTGAGTTGTTTAAATTAAATA
AATTTGAGAATTTTCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565989 mitogen-activated protein kinase 20 [Arabidopsis thaliana]8802e-092
ABG54347 HA-tagged mitogen activated protein kinase 20 [synthetic construct]8802e-092
XP_002881877 ATMPK20 [Arabidopsis lyrata subsp. lyrata]8731e-091
BAJ85722 predicted protein [Hordeum vulgare subsp. vulgare]2199e-016
AEH42669 mitogen-activated protein kinase 12 [Solanum lycopersicum]2063e-014

Swiss-Prot top hits (Blast detail)Scoree value
Q9SJG9 Mitogen-activated protein kinase 208809e-094
Q5ZCI1 Mitogen-activated protein kinase 101891e-013

TrEMBL top hits (Blast detail)Scoree value
B9H811 Predicted protein2725e-022
C6F1T8 MAPK2563e-020
B7FLM0 Putative uncharacterized protein (Fragment)2001e-013
B8ACD7 Putative uncharacterized protein1911e-012
Q0JL22 Os01g0629900 protein1892e-012

Arabidopsis top hits (Blast detail)Scoree value
AT2G42880.1 ATMPK20; MAP kinase8816e-095
AT1G53510.1 ATMPK18; MAP kinase1844e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
91  33%

Unigene MembersMember information