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Information for unigene UN11547

FASTA Sequence
Unigene ID: UN11547Length: 1375 SSR 
AAAAAAAAAAACGTTGAGATTAAATTATCAGAAAGATGAAAACATAGTCTGGAACTACAATCATTAAAGGTACAACGGAATAACAA
CAAACAAACACAGTCTACTGTCATCTTTTTGAGTCTCTCTTTCTCTCTCTCTCCTTGTATGGACTTTGCCAATACTTTTGAAACTA
TATGTACAGTACACACACACACACTTCTTAGACAATGAGAGGCAAAAGCAAACCCATCGTTCAACATGATGATACAACTTAATAAC
CCTGCGCCTGCCTGCGGGTGGGTTCGTTCATTCACATGCTATCTTGGTGTCGAAGCTGCTAAGGCAAATGGTGAAGGCCTGGAAGG
CAGAGATAGGGTACTGAAAATCCATTGTGAACACATCTTTGCCGACTTTCCCAAACTGGAGAATCACGTTTTCGTGCTCAGGTCCA
GCAGGTCCGTTCTCAGGAGCTGCTACGAGCTGGAAGTTTTTGACGGAAGCAACAGTGACTCTCCCATTGAAGTTGAGGCACCAGCA
CTGGAGCTGTTCGTGCCATCTGGGGGCTTTGTTCTTGAGGACAAGCAGCCCTTCCTTCTGAGCAGGACCAGACGTCGACGAAGTTG
GAAGACTCTCTGAACGAACTGATTTAGACCTGAAGAAGGAGAAGGATGGGAACATATCGAGATTGGTGTGGAGTAGTTCCGTCTGA
GTAGGAGCTGTACCTCCAGGTTCTACAGCTGATGCAGGGATGGCATCCATTACACACTGCATCCTCCTCGGTCCTCTGGAGCCCAA
GACGTTAAGCTCATAGGAGATATGTGCGACAGGGTAGTTGCCAGAAGGAACTCTGGGGGTCACTTGTTTCAAAGAGAGAAGTCTGG
AAGAACGGGTTCTGGTAACCTGAGCTCCAGGATTGGTGGGCTGAGCATCGTAGACAGTGAACTTGGTCCCAAGAAAGTTAGACCTT
AGCTTTCCGATGTAGGAAGTGCTTCCTCTGGAGACATCATCAGAGTTTAAGGAGATGATGTAGTCAGTGCAAGTAGGCCTCCGAAA
CCTCTTGGCAGCAAGAAGGAACTTTCCATCATCATTAGAAGCAGCTGCTGCTGCTTGGTTAAGGCCGAGGTAGAGATGGTAAGTTT
GGTTAGTGCGGTTTCGGATGATATAGCATTGAACAAGGGATCCCAAAACTGTAAAGCCAAAAAGATGTGTTCCCCTACCTACCAAA
TCTCTGTGTTAGTTATCCGAGAGCTTCGCTTCGCTTCACTTCACTTGGATGGATTGAGTTTGAACACCAATAAAATCCGGATCGAA
CTCGGTAAGTCTCAGATTCGGGTTTCGACACTCCGAAGCAAATGCCTTTCTTACACCAACACACAAGTGGTCAGAGGTAATAATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001189775 Tubby-like F-box protein 3 [Arabidopsis thaliana]14021e-152
NP_850481 Tubby-like F-box protein 3 [Arabidopsis thaliana]13974e-152
XP_002882136 hypothetical protein ARALYDRAFT_322431 [Arabidopsis lyrata subsp. lyrata]13851e-150
XP_002269323 PREDICTED: hypothetical protein [Vitis vinifera]12182e-131
ABK94895 unknown [Populus trichocarpa]11332e-121

Swiss-Prot top hits (Blast detail)Scoree value
Q8VY21 Tubby-like F-box protein 313972e-153
Q10LG8 Tubby-like F-box protein 610621e-114
Q8H485 Tubby-like F-box protein 119885e-106
Q6Z2G9 Tubby-like F-box protein 57941e-083
Q944S3 Tubby-like F-box protein 56283e-064

TrEMBL top hits (Blast detail)Scoree value
C0Z2Z7 AT2G47900 protein14027e-153
A9PEU2 Putative uncharacterized protein11473e-123
B9HY64 F-box family protein11276e-121
B9DI15 AT2G47900 protein (Fragment)11097e-119
B9RSZ5 Phosphoric diester hydrolase, putative11033e-118

Arabidopsis top hits (Blast detail)Scoree value
AT2G47900.1 AtTLP3 (TUBBY LIKE PROTEIN 3); phosphoric diester hydrolase/ transcription factor13981e-154
AT2G47900.2 AtTLP3 (TUBBY LIKE PROTEIN 3); phosphoric diester hydrolase/ transcription factor13981e-154
AT2G18280.1 AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor7402e-078
AT2G18280.2 AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor7402e-078
AT1G43640.1 AtTLP5 (TUBBY LIKE PROTEIN 5); phosphoric diester hydrolase/ transcription factor6282e-065

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  17%
 
111  17%
 
93  50%
 
101  17%

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