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Information for unigene UN11572
| FASTA Sequence |
| Unigene ID: UN11572 | Length: 944 |
SSR | | GGGTTTCCGTTAAAGCAAAAAACATGAATGTTCTTCTTCTTCTTCACATCTCACTCTTTCTTCTTCCACTACTGCTTCAACAAGAG
CCATCTTCTTCCGCCATTATACGGAGCTTGAAGAAACGCCATGGGAGCAGCAGCAGCAGCAGTGGGAACCAGTACAGCTCGAGCAG
ACCTTCTTCTTTCCAAGGGAATAGAAGCACGTGCTCTCTCTTCATGGGCACGTGGGTCCACGGCGACTCGTACCCTCTGTACAAAC
CGGCGGATTGTCCCGCCGTGGTGGAGAGTGAGTTCGATTGTCAGATGTACGGACGTCCTGACTCCAACTACCTCAAGTATCGATGG
CAACCCCAGAATTGCAACTTGCCCACGTTCAATGGTGGTGAGTTTCTGTTGAGAATGAAGGGGAAGAACATAATGTTTGCGGGTGA
TTCGTTGGGGAAGAATCAATGGGAGTCGTTGATCTGTCTCATTATGTCATCTGCACCCTCCACTCGTACTCAGATGACCAGAGGTC
TCCCTCTCTCCACCTTCAGATTCTTGGACTATGGGATAACTATGTCGTTTTATAAAGCTCCCTTCTTGGTGGACATAGACGCTGTT
CAAGGCAAGCGTGTGTTGAAACTTGAGGAGATCTCTGGCAATGCTAATGCTTGGCATGACGCTGATCTTCTCATCTTCAATACTGG
TCACTGGTGGAGCCACATCGGGTCTCAGCAAGGATGGGACTTGATTCAATCTGGCAATTCTTATTACCAAGACATGGACCGCTTCG
TTGCAATGGAGAAAGCTCTTCGTACTTGGGCTTATTGGGTTGAAACACATGTGGATAGATCCAGAACTCAAGTCTTCTTCCTCTCC
ATTTCTCCACACATGACAATCCGAGTGACTGGGCAGCATCACGTCTTCGGATCCAAGACTGCTACGAGAGACGAGCCATCACAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34605 unnamed protein product [Thellungiella halophila] | 1352 | 4e-147 |
| AAM62736 unknown [Arabidopsis thaliana] | 1314 | 1e-142 |
| NP_200668 uncharacterized protein [Arabidopsis thaliana] | 1311 | 2e-142 |
| NP_974961 uncharacterized protein [Arabidopsis thaliana] | 1311 | 2e-142 |
| XP_002866280 hypothetical protein ARALYDRAFT_495984 [Arabidopsis lyrata subsp. lyrata] | 1303 | 2e-141 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LEB9 Putative uncharacterized protein | 1314 | 7e-143 |
| Q3E895 Putative uncharacterized protein At5g58600.2 | 1311 | 1e-142 |
| Q9LUZ6 Genomic DNA, chromosome 5, P1 clone:MZN1 | 1311 | 1e-142 |
| B9HNE1 Predicted protein | 929 | 3e-098 |
| B9SK62 Putative uncharacterized protein | 914 | 2e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58600.1 PMR5 (POWDERY MILDEW RESISTANT 5) | 1311 | 9e-145 |
| AT5G58600.2 PMR5 (POWDERY MILDEW RESISTANT 5) | 1311 | 9e-145 |
| AT2G30010.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: PMR5 (POWDERY MILDEW RESISTANT 5) (TAIR:AT5G58600.1); Has 709 Blast hits to 698 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 709; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 768 | 8e-082 |
| AT1G29050.1 unknown protein | 649 | 5e-068 |
| AT2G34070.1 unknown protein | 628 | 1e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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