Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN11634

FASTA Sequence
Unigene ID: UN11634Length: 834 SSR 
GGATCCCTCTCTCTCTCTCCGCCACTCTACAATGGCCGGTCTACTCAAAACGCCGTCTTTACACCTCACGCCGTCTCTTACTCATG
CACCCTCTGTGCCCTTCAAGCCCTTCTGCGTCTCCTTCGCCGGAGGAAGGAGAACCAGCTTCTCACTCTCTCGCCGAGCTTCTCTC
CGTTCTGTCTCTGGTGGTGGCTATCCTCTCCGCTTACTTAACTTCGTACCCTTTGCTTCTGGAGAAGCAGAAACGACTGAGACTGA
GGTGGAATCGAGCGAACCTGAAGTCTAGGAGAGTGATGGTGCTGAGGGTGAAAACGCTGGCGCTGAGGAAGAAGAAGTGGCGGTTA
CCATAGCGTTGCTGAGTTCGTACAAAGAAGCTTTAGCAGAGAACAACGCGGAGAAGATTGCTGAGATAGAAGCGTCACTGAAGTCC
ATCGAAGATGAAAAGTTTCAGCTCCAGGAGAAAGCCATCTCTTTGTCTAATGAGTTAACTGTGGAGAGGGATCGGCTGATAAGGAT
CAGTGCGGATTTCGACAACTTCAGGAAGAGGAACGAGAGGGAGAGGCTGAACCTTGTTTCAAATGCTCAAGGGGAGGTTGTTGAGA
ATCTTTTGGCGGTTTTGGATAATTTCGAGAGAGCTATGTCCCAGATCAAGGTGGAGACCGAGGGAGAAGAGAAAGTCACAAACAGC
TATCAGAGCATATACAAGCAGTTTGTTGAGATTCTAGTTCGCTTGGTGTTGTCACTGTGGAGACTGTCGGCAAGCAGTTTGATCCG
ATGCTACACGAGCAATAATGAGGAGATTCTGCGGATACGAGAGGGTATAGTACTGAGATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568356 molecular chaperone GrpE [Arabidopsis thaliana]9331e-098
NP_850840 molecular chaperone GrpE [Arabidopsis thaliana]5996e-060
XP_002873846 EMB1241 [Arabidopsis lyrata subsp. lyrata]5862e-058
XP_002530954 Protein grpE, putative [Ricinus communis]4813e-046
CAN65730 hypothetical protein VITISV_011922 [Vitis vinifera]4795e-046

Swiss-Prot top hits (Blast detail)Scoree value
Q8DJB3 Protein grpE2051e-015
Q59978 Protein grpE2042e-015
B7KLH9 Protein grpE2032e-015
Q114R5 Protein grpE2032e-015
A2BNE2 Protein grpE2005e-015

TrEMBL top hits (Blast detail)Scoree value
Q94K56 GrpE protein homolog9338e-099
Q9XQC7 GrpE protein homolog5994e-060
B9SY85 GrpE protein homolog4812e-046
A5BJM9 Putative uncharacterized protein4794e-046
B9I664 GrpE protein homolog4794e-046

Arabidopsis top hits (Blast detail)Scoree value
AT5G17710.2 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization9461e-102
AT5G17710.1 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization9335e-101
AT1G36390.1 co-chaperone grpE family protein2938e-027
AT1G36390.2 co-chaperone grpE family protein2938e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
111  50%

Unigene MembersMember information