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Information for unigene UN11644

FASTA Sequence
Unigene ID: UN11644Length: 1489 SSR 
GGACAGCCATTTCCACTCTCAACACTCTGTAAACTATAACACAGAGAGAGAGAGAGAGAGAGCTTCGATCTTTAGTAAGGGAAGAG
CTAAAGCTTACAGATCGTAAAATCGGAGAAGATGCAGCCGTACGGTATCCAATCGATGCTCAAGGAAGGCTACAGACACCTCTCGG
GTCTCGACGAAGCCGTCATCAAAAACATCGAGGCTTGTAAGGAGCTCTCCACCATCACCCGCACTTCTCTCGGCCCCAACGGGATG
AACAAGATGGTTATAAACCATTTAGATAAGCTCTTTGTGACCAACGACGCTGCGACGATTGTGAACGAGCTCGAGATTCAGCACCC
TGCCGCGAAGATTCTGGTTCTAGCTGCCAAGGCTCAGCAAGAAGAGATCGGGGACGGAGCTAATCTGACGATCTCCTTTGCTGGGG
AGCTTTTGCAGAACGCTGAGGAGCTTATTAGGATGGGGTTGCATCCGAGTGAGATTATCAGTGGATATAACAAAGCTATCGTTAAG
GTTGTTGAGATTCTTGAGCAGTTGGTTGAGAGTGGTTCTGAGACGATGGATGTGCGTAGCAAAGATGAAGTTGTTTCGAGGATGAG
AGCTGCTGTCGCTAGCAAGCAGTTTGGTCAAGAGGAGATTTTATGTTCCTTAGTTGCTGATGCTTGTATTCAAGTCTGCCCAAAGA
ATCCAACGAACTTCAATGTGGATAACGTCCGTGTTGCCAAGCTTCTTGGAGGAGGATTGCACAACTCTTGCATTGTCCGTGGCATG
GTCTTGAAAAGTGATGCTGTTGGGAGCATAAAGAGAATGGAGAAGGCAAAGGTTGCTGTGTTTGCTGGGGGCGTGGATACTACTGC
AACAGAGACTAAAGGAACTGTCTTGATCCATAGCGCTGAGCAGCTAGAGAATTATGCAAAGACAGAGGAAGCTAAAGTCGAGGAGC
TGATTAAAGCTGTTGCTGAATCAGGAGCTAAAGTAATTGTTAGTGGAGGATCAGTTGGAGAAATGGCATTGCATTTCTGTGAGCGC
TACAAGATAATGGTCTTGAAAATTAGCTCAAAGTTTGAACTCAGGCGTTTCTGCCGTACAGCTGGGGCTGTCGCTCATTTGAAACT
GAGCCGACCAAGCCCTGATGATCTGGGTTACGTTGATTCCATATCAGTCGAGGAGATTGGTGGTGTGACAGTCACTATTGCAAGAA
ACGAGCAAGGTGGTAACTCAATCTCTACAGTTGTTTTGCGTGGAAGCACGGATAGCATCTTGGACGACCTTGAAAGAGCTGTTGAT
GATGGAGTTAATACATACAAGCTATGTGCAGAGACAGCCGTATCGTTCCTGGGGCTGCAGCTACTGAAATTGACTGGCTCAGAGAT
TGAGATATGCCAATGCAGAACAGGTAGACAATACGCATCACAATACGCATAGAGCTTCGAGTTGTACCAAACCTTGCGACACGCTG
CCTCATGCGATGGAATCATGCCTCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882322 hypothetical protein ARALYDRAFT_477651 [Arabidopsis lyrata subsp. lyrata]19513e-216
NP_566219 TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana]19388e-215
AAF05855 putative T-complex protein 1, theta subunit (TCP-1-Theta) [Arabidopsis thaliana]19388e-215
XP_002871808 predicted protein [Arabidopsis lyrata subsp. lyrata]18771e-207
XP_002282088 PREDICTED: hypothetical protein [Vitis vinifera]18025e-199

Swiss-Prot top hits (Blast detail)Scoree value
Q552J0 T-complex protein 1 subunit theta11257e-122
Q3ZCI9 T-complex protein 1 subunit theta10702e-115
Q4R5J0 T-complex protein 1 subunit theta10692e-115
P42932 T-complex protein 1 subunit theta10656e-115
P50990 T-complex protein 1 subunit theta10612e-114

TrEMBL top hits (Blast detail)Scoree value
Q94K05 At3g0396019386e-215
Q9SQR6 Putative T-complex protein 1, theta subunit (TCP-1-Theta)19386e-215
B9SHG6 Chaperonin containing t-complex protein 1, theta subunit, tcpq, putative17792e-196
A9PG05 Putative uncharacterized protein17754e-196
B9I5Y4 Predicted protein17754e-196

Arabidopsis top hits (Blast detail)Scoree value
AT3G03960.1 chaperonin, putative19383e-217
AT3G18190.1 chaperonin, putative4392e-043
AT3G11830.1 chaperonin, putative3901e-037
AT3G20050.1 ATTCP-1; ATP binding / protein binding / unfolded protein binding3773e-036
AT1G24510.1 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative3551e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
81  50%

Unigene MembersMember information