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Information for unigene UN11669

FASTA Sequence
Unigene ID: UN11669Length: 1445  SNP
CCTGAACTGAAACCATATCAAACCCAAAAAAACGAGTAAAATTTTTATGTTCCATACATTATTGAAATATAAAACCAAACCAGTAG
AACCATAACCGGATTGGCTGAAAAGAGGTACCACCAATTGCTAACTTTGACTGAAAAAGTACCACACGAATTCAACAGAAGAAATG
AGAACAATAGATCTTAAAATGAGTAAAACGGTTTACAATGGTATCAAATGAGTAGAGGTTGTTGTTCAGACCACAGATTCTGTAAT
CACCTCCAGATCAATCAGTTGAGTTTCAGTGATGCAAATGATGCAGCCAGATCCAAAGCTGCGTTCACTTGAGAGGCATCCGTTCC
CTGTCCAGATGCAAGACCACTTTTCCCTTTCCCGCATCTCCCTTTCAGAGGACCCAACGCAGTAGTAAGCCACTCAGTAACGTCTA
ATTGCTTGAATTTATCAGATTTGTCTGGAACTCCTGCACACACAACCGCCTTGTTGGTCGTTTCATCTGTGCTGAACACCATTATC
GACATTCCCTTCTTTTCCATAACTTTCGATACAGCTTCTCGCACGGCAGCTGCATCAAGACCTACATCAAGCTGGATAATGCAGAA
TGTCTTCCCATCTGATGCTGCAGACTCTGCCGCCTCTGTTGCTACTTTCACAGATATCTTCAGGTTCTGCTCTGCTATTTTCTTTT
GAGCTTTCCTCCCTTCATTCTGAAGCAGAGCAATCTTGGCCCTTATATCTGCCTTTTTGGCCGCTGGCATAATTGCTGAGTCTACC
CGGCTTTTCAGAGCAGCAACTTTCTTTTCCAATGCACTCCCCTCCGCTTTGGATGCATCCTCAACTTCTTTTTCAAGTGAGGACGC
CACGTTCAATGCATCAAAAGCACATTCGGTAGTCACAGCAGTTACCCTACGAATACCTTTCGCAATTCCCTCCTCGGATAGACGAG
CAAACGCTTTGGCTTCACGGGTGTTTGTTATGTGTGTTCCTCCACAAAACTCAGAAGAAAATGATGACCACTCATCGTTTTCAGGA
TCAGCCAAGAGGTCCTCGACCCGTCTCCCAATGGACACTACTCTGACAGGATCAGGATAGACTTCACCAAACACTGCTCTTAGACC
TTTGATTCGCTTGGCTTCAGAAAGTACTGATTCCTTGGAAAATACTTCCAATTCATCTTTGATCTGTTTATTAACTATGGCTTCGA
TCTTTCTCAAATCTTCAGGATCAACCGGCTTGCCGTGGGGAAAAATCAAAACGCAGTTTTTCAGGAAGAACTATTGATCCCTTCTG
ATCTATATGATCCCCGAGCACTTCCTTCAGGGCGAAATTTAACATATGCGTACAAGTATGATTAGGAGCGATGAGTTTACGTCTCT
CATAATCAACCTTGCAAGTCACTGTATCCCCCACAGATACCACTCCAGTTTCTTTAGAGAGATAACCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894237 cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata]14711e-160
NP_175439 Alanyl-tRNA synthetase [Arabidopsis thaliana]14621e-159
AAD50044 cytosolic tRNA-Ala synthetase [Arabidopsis thaliana]14621e-159
CAA80381 cytosolic tRNA-Ala synthetase [Arabidopsis thaliana]14541e-158
CAA80380 mitochondrial tRNA-Ala synthetase [Arabidopsis thaliana]14541e-158

Swiss-Prot top hits (Blast detail)Scoree value
P36428 Alanyl-tRNA synthetase, mitochondrial14625e-161
Q54Y20 Alanyl-tRNA synthetase4822e-047
P40825 Alanyl-tRNA synthetase, cytoplasmic4383e-042
Q5RC02 Alanyl-tRNA synthetase, cytoplasmic4052e-038
P49588 Alanyl-tRNA synthetase, cytoplasmic4043e-038

TrEMBL top hits (Blast detail)Scoree value
B9SYR5 Alanyl-tRNA synthetase, putative11912e-128
C5YTZ0 Putative uncharacterized protein Sb08g00823010391e-110
B8BFZ6 Putative uncharacterized protein10156e-108
B9G7S6 Putative uncharacterized protein10156e-108
Q10A14 Alanyl-tRNA synthetase, mitochondrial, putative, expressed10156e-108

Arabidopsis top hits (Blast detail)Scoree value
AT1G50200.1 ALATS (ALANYL-TRNA SYNTHETASE); ATP binding / alanine-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleic acid binding / nucleotide binding14634e-162
AT5G22800.1 EMB1030 (EMBRYO DEFECTIVE 1030); ATP binding / alanine-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleic acid binding / nucleotide binding1443e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  22%
 
83  33%
 
92  22%
 
61  11%
 
211  11%

Unigene MembersMember information