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Information for unigene UN11669
FASTA Sequence |
Unigene ID: UN11669 | Length: 1445 |
| SNP | CCTGAACTGAAACCATATCAAACCCAAAAAAACGAGTAAAATTTTTATGTTCCATACATTATTGAAATATAAAACCAAACCAGTAG
AACCATAACCGGATTGGCTGAAAAGAGGTACCACCAATTGCTAACTTTGACTGAAAAAGTACCACACGAATTCAACAGAAGAAATG
AGAACAATAGATCTTAAAATGAGTAAAACGGTTTACAATGGTATCAAATGAGTAGAGGTTGTTGTTCAGACCACAGATTCTGTAAT
CACCTCCAGATCAATCAGTTGAGTTTCAGTGATGCAAATGATGCAGCCAGATCCAAAGCTGCGTTCACTTGAGAGGCATCCGTTCC
CTGTCCAGATGCAAGACCACTTTTCCCTTTCCCGCATCTCCCTTTCAGAGGACCCAACGCAGTAGTAAGCCACTCAGTAACGTCTA
ATTGCTTGAATTTATCAGATTTGTCTGGAACTCCTGCACACACAACCGCCTTGTTGGTCGTTTCATCTGTGCTGAACACCATTATC
GACATTCCCTTCTTTTCCATAACTTTCGATACAGCTTCTCGCACGGCAGCTGCATCAAGACCTACATCAAGCTGGATAATGCAGAA
TGTCTTCCCATCTGATGCTGCAGACTCTGCCGCCTCTGTTGCTACTTTCACAGATATCTTCAGGTTCTGCTCTGCTATTTTCTTTT
GAGCTTTCCTCCCTTCATTCTGAAGCAGAGCAATCTTGGCCCTTATATCTGCCTTTTTGGCCGCTGGCATAATTGCTGAGTCTACC
CGGCTTTTCAGAGCAGCAACTTTCTTTTCCAATGCACTCCCCTCCGCTTTGGATGCATCCTCAACTTCTTTTTCAAGTGAGGACGC
CACGTTCAATGCATCAAAAGCACATTCGGTAGTCACAGCAGTTACCCTACGAATACCTTTCGCAATTCCCTCCTCGGATAGACGAG
CAAACGCTTTGGCTTCACGGGTGTTTGTTATGTGTGTTCCTCCACAAAACTCAGAAGAAAATGATGACCACTCATCGTTTTCAGGA
TCAGCCAAGAGGTCCTCGACCCGTCTCCCAATGGACACTACTCTGACAGGATCAGGATAGACTTCACCAAACACTGCTCTTAGACC
TTTGATTCGCTTGGCTTCAGAAAGTACTGATTCCTTGGAAAATACTTCCAATTCATCTTTGATCTGTTTATTAACTATGGCTTCGA
TCTTTCTCAAATCTTCAGGATCAACCGGCTTGCCGTGGGGAAAAATCAAAACGCAGTTTTTCAGGAAGAACTATTGATCCCTTCTG
ATCTATATGATCCCCGAGCACTTCCTTCAGGGCGAAATTTAACATATGCGTACAAGTATGATTAGGAGCGATGAGTTTACGTCTCT
CATAATCAACCTTGCAAGTCACTGTATCCCCCACAGATACCACTCCAGTTTCTTTAGAGAGATAACCAC
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GenBank top hits (Blast detail) | Score | e value |
XP_002894237 cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata] | 1471 | 1e-160 |
NP_175439 Alanyl-tRNA synthetase [Arabidopsis thaliana] | 1462 | 1e-159 |
AAD50044 cytosolic tRNA-Ala synthetase [Arabidopsis thaliana] | 1462 | 1e-159 |
CAA80381 cytosolic tRNA-Ala synthetase [Arabidopsis thaliana] | 1454 | 1e-158 |
CAA80380 mitochondrial tRNA-Ala synthetase [Arabidopsis thaliana] | 1454 | 1e-158 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P36428 Alanyl-tRNA synthetase, mitochondrial | 1462 | 5e-161 |
Q54Y20 Alanyl-tRNA synthetase | 482 | 2e-047 |
P40825 Alanyl-tRNA synthetase, cytoplasmic | 438 | 3e-042 |
Q5RC02 Alanyl-tRNA synthetase, cytoplasmic | 405 | 2e-038 |
P49588 Alanyl-tRNA synthetase, cytoplasmic | 404 | 3e-038 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SYR5 Alanyl-tRNA synthetase, putative | 1191 | 2e-128 |
C5YTZ0 Putative uncharacterized protein Sb08g008230 | 1039 | 1e-110 |
B8BFZ6 Putative uncharacterized protein | 1015 | 6e-108 |
B9G7S6 Putative uncharacterized protein | 1015 | 6e-108 |
Q10A14 Alanyl-tRNA synthetase, mitochondrial, putative, expressed | 1015 | 6e-108 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G50200.1 ALATS (ALANYL-TRNA SYNTHETASE); ATP binding / alanine-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleic acid binding / nucleotide binding | 1463 | 4e-162 |
AT5G22800.1 EMB1030 (EMBRYO DEFECTIVE 1030); ATP binding / alanine-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleic acid binding / nucleotide binding | 144 | 3e-009 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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