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Information for unigene UN11676
| FASTA Sequence |
| Unigene ID: UN11676 | Length: 985 |
SSR | | GGAGAGAGAGAAAATAAAATCTCATACCATGGCTTCGCTTCCTGTCCACTTCTCCAGGAATCATTTCTCTTCGCCCAATTTCTCCC
GCAAATTCCGCCGTTCCACCGAGACCAGATCTTTTGTAGCTCTTGTACATTGCTCCGCTAGAGAAAATGATCAAGGAATCAAGACG
ACTTTGTTTCCTGTGAAGGAGCTTGGATGTTTGGCTTGCGCCGCTCTTTCTGCTTTCACTCTCACTATGGCCTCTCCTGTCATTGC
TGCTAATCAGAGACTTCCTCCGCTTTCAACGGATCCAACTCGGTGTGAACAGGCTTTTGTTGGTAACACGATAGGTCAAGCAAACG
GGGTCTATGACAAGCCACTCGATCTCAGGTTCTGCGACTACACCAACGATCAGTCTAATCTCAAAGGCAAGACTCTCTCTGCTGCC
TTGATGTCAGGTGCCAAGTTTGATGGTGCTGACATGTCTGAAGTCGTTATGTCTAAAGCTTACGCCGTTGGAGCTAGCTTCAAGGG
GGTGAATTTCTCGAATGCCGTTATCGATCGGGTGAACTTCGGGAAGTCGGATCTAAAAGGAGCTGTGTTCAAGAACACGGTTTTGT
CAGGTTCGACATTCGAGGAGGCAAACCTGGAGGATGTGGTCTTTGAGGACACCATCATTGGTTACATAGACCTTCAGAAGATATGT
AGGAACGTGACAATAAACGAAGAAGGAAGACTCGTCTTGGGTTGCAGATAAAGAGATGAAGAGACAAAAAGGGTTTTGGATTTGGT
GTGTGTGTGTAAGAATTTGAGAGTTGATTGACACAAAAGAATGTATGAACAAATAAAGTACGTTCAAGTGTTGAAGGATATTAGGA
CTCAGAAGAGTGTTATGAGGTTTGTATAATTAATTCCTGTAAAAGTTTGTAATCAGACAAAAGGGTTTTTCTCTGTTATTCGTTAA
TTACGTAACGTATATGCAAAACGAACAATATTTGGTCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002865974 thylakoid lumenal 17.4 kDa protein, chloroplast [Arabidopsis lyrata subsp. lyrata] | 984 | 2e-104 |
| NP_851183 thylakoid lumenal protein [Arabidopsis thaliana] | 981 | 4e-104 |
| NP_200161 thylakoid lumenal protein [Arabidopsis thaliana] | 973 | 4e-103 |
| NP_001190531 thylakoid lumenal protein [Arabidopsis thaliana] | 899 | 1e-094 |
| XP_002318440 predicted protein [Populus trichocarpa] | 791 | 5e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P81760 Thylakoid lumenal 17.4 kDa protein, chloroplastic | 981 | 2e-105 |
| P73709 Uncharacterized protein slr1819 | 122 | 8e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I1Y5 Predicted protein | 791 | 3e-082 |
| B9SJT2 Thylakoid lumenal 17.4 kDa protein, chloroplast, putative | 779 | 8e-081 |
| B7FHD5 Putative uncharacterized protein | 759 | 2e-078 |
| B4FHA0 Putative uncharacterized protein | 737 | 6e-076 |
| A2Z925 Putative uncharacterized protein | 728 | 6e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G53490.1 thylakoid lumenal 17.4 kDa protein, chloroplast | 982 | 1e-106 |
| AT5G53490.2 thylakoid lumenal 17.4 kDa protein, chloroplast | 979 | 3e-106 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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