Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN11677

FASTA Sequence
Unigene ID: UN11677Length: 1308 SSR 
GGACAATCACACAAGAAACAAGACTCTTTAATTAAGAATCAACTCTTTACTCTTTCAAACTCTTTACATATTCAAAGACTCGTATA
TATCAGAACAGGTCAATATTCCCATGACCACTAATGTGGATCATGGTTTCTTCTAGCTCATCTGTAATTAAGAATCTAGTTTTAAA
GAAAAACCACCTTTCACGAGAAGACGGGTGTCCCCGAAGTTTGAACGGTGGCTACTAGCACCCAGAAGATGGCACACAAGGCACCC
ACAATTGATAAGAGAAGAAACCCTCTATTTATGCTACGCTTCTTCTTCGTTATTACGGCAGTATTCACTGGCGTTCCATTAGCCTT
TCCACTGAACCTGATACGGCTAAAGCTAGACATACGCACAAATGTCCGGTTAATAGGACCTTCACACGCAGAGGCTGGCGTTGAAG
GTATTGAATCCATGAATGCCCACAGAGCCGATGAGAATGGGCTCGTTCCACCACCACCACCATTGACGCCTTCTTGGTCTTGGGCA
TCATCTACACTCGTAGCAAGATTTGTGGAACCGGGGATCACACCTGATGAAGGTGACGCAAATGCTCCACAAATAACAGACTGCGG
TTGATCAAAGAGGACAGCAGTCTGATTATCATCTTCAAGCCACAGGTCATCAGTGAACTGATTGAGATTTGGGGCAGGATCCATGA
TGTTGTTCAGCTTGTTTTCAGAGGTCTGGTCCTGGAACTGTTGATAAAGTGATTGCTATTCCTGGTCGGATGTGTTGTCGGCAAAG
TTACCCAACGGATCTGCAGAAGGTTCCTGAAGAATAGGTTCCATATCCAAAGACATGGGAACGTCATGGAACAATTGGTCAAAGTC
ATTAAAGTCTCCATATTCACCGGGGTTCAAGAGCTGTGCAGGGTTGTCAACTAAAGATAAAGAAGCTCCGAGATCAGGTGTCAGAA
GGTCATACATTTCAATGTAGTCCTCCTTCTCAAACACCAAAGGCGAGTTATTGGGAGCTGACGTGACGTCAATAGACTCATAACTC
GACGGCATGTCGTTTGGAAAGAAGAAGTCTCCAGTTCCCTGAGGTTTAAGAAACTCTCTAGCAGAAGTATTCACCAACGTGCTCTG
CAAATCTTCTTCTCTGTTAACCTGAGGAATGTTGGCAAATGTTTGAGGAACCCCAGGTGCATATGGGATTCCACTGAGAATCTCCT
CGAGATCATCTAACTGAACATTTACAAGGCTAACATTATCCACACAACGAACCACAGGTTCCTCTTCTTCATCAGCCCATTCTTCT
TCTTGGAAAGGAGCACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564440 NAC domain containing protein 17 [Arabidopsis thaliana]10221e-108
XP_002891082 ANAC017 [Arabidopsis lyrata subsp. lyrata]9933e-105
XP_002891081 ANAC016 [Arabidopsis lyrata subsp. lyrata]8392e-087
AAM67294 NAM-like protein [Arabidopsis thaliana]7863e-081
NP_564439 NAC domain containing protein 16 [Arabidopsis thaliana]7853e-081

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9XIC5 At1g34190/F23M19.1310228e-109
Q8LFG7 NAM-like protein7862e-081
A4FVP6 At1g341807852e-081
Q9XIC4 F23M19.14 protein7852e-081
B9H7Z3 NAC domain protein, IPR0034413336e-029

Arabidopsis top hits (Blast detail)Scoree value
AT1G34190.1 anac017 (Arabidopsis NAC domain containing protein 17); transcription factor10224e-111
AT1G34180.1 anac016 (Arabidopsis NAC domain containing protein 16); transcription factor7861e-083
AT1G34180.2 anac016 (Arabidopsis NAC domain containing protein 16); transcription factor7861e-083
AT1G32870.1 ANAC13 (Arabidopsis thaliana NAC domain protein 13); transcription factor1174e-006
AT1G32870.2 ANAC13 (Arabidopsis thaliana NAC domain protein 13); transcription factor1174e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
92  67%

Unigene MembersMember information