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Information for unigene UN11679

FASTA Sequence
Unigene ID: UN11679Length: 1615 SSR 
GCGCTTAGCCTCCTCAGCTTGCCTCTCAAGCTCTTCCTGCCTAAGGCGCTCCTCTTCCTCCTTTCTCAATTTTTCTTCCTCTTCCT
TCTTCTTTCTCTCTTCAGCTTCCTGCCGCCGTGCAAGAGCCTCTTGCATCTCTCTAACATGTTTAGGAATTTTCTTCTCAGCTGCT
TTAGCCTTTGCATCCTTCTTCTTCCCCTGCAGTGGTTCAGGTACTGATTCTTCTTGTTTTTCCTCCTTAGCCTCCACAGTAGTGGT
TCCGGCAGCTGCAGCTTTCTTTTCCTTCTCCTTCTCCTTCTTCTTCTTCCTTTTCTTCGCTGCAGCACTCTCTTCTTCTCCTTCTT
TCTCACCATCATTCTCTACAGCTGCAACAACAGGCTGAGGCTGAGCTTGAACTTTCTCTTCTTCAGCAGGTTTTCCAGAAACAGGG
CCTTCACCAAGCTCAGCAAGAAGCTTGTCCAAATCATCCTCTTCCTGTACCGTCCTCCCACTCTTATTCTTCTTCTTTTTCTTACT
CTTCGCAGGTTCTAAAACCTCCGCACTCTTAGCATCAGAAGCTTTATCCTTACTCACTTCCTCAGCAACTGAGTCATCATTATCAT
CACCTAACGACGCCAAAACACTACTTCCCTTCTTCTTAGACGACTTCTTCTTCCCCGTAAACATAATCTCAGGCTTCTCTTCCTCC
TCAACTGCCTTACTCTCCTCCTCCTCATCATCATCAAGCAAAGCAGCCGCAAATGAGTTCCCACTCTTCTTGGACGACGATTTAGA
AGACTTCTTCTTACCAGAGAAAGTGACTGGATCCACCTCTTCCTCCTCCTCATCTTCATCATCAAGCAAAGCAGCCGCAAATGAAT
TACCACTCTTCTTGGAAGATGACTTAGAAGACTTCTTCTTACCAGAGAAGGTGATTGGCTTCACCTCTTCCTCCTCCTCCTCATCT
CCATCGCCACCAAGTGCATCAAAAGCTGAAGCCGCAAAAGACTTACCACCCTTCTTAGGCTCATCCTCGTCCACTTCATCATCACC
ATCCTTATCTTCTCCACCATCACCATCATCATCTAACAAAGCAAAGCTAACGGATCCACCACTACCTTTCTTAGACTTAGACTTCT
TCTTCTTCCCTTCAAAAGGAATCTCCGGAACAACAACATCGTCTCCTTCTTCATCATCCAGAACGGCACCTTTCTTATCACCTTTC
TTACTCTTCTTCTTCTTCCCGGTGATAACAACAACCTTCTCTTCCTCGCCTCCTCCTTTAGGTTGATCCTCAGAGAGCTCCGTACC
TATGGAGTACTCATCGTCATCGATCTGAACACCTTTCTTCTTGGATTTACCACCACCACCTACGACGAGAGACGAAGCAGTTGGTT
CGTCGTCTCCGCCACGAGCACTAGGCTTCTTCCGCCCCATTTATATCTTACGTGTCGGGGAGATAGAGGGAGGGATGAAGCGTGGT
TGGTTAGGGTTAGCGAGATTCGGAGATAGCGCGGCGGCGCAGAGATAGAGAGAGAGAGAGAGAGAAGGGAGTGAGCGAAGCGAAGG
GCACTTTTGGTTTGTTAAACCGGACTTGAAGAGGTTCCCCCTAGGGTTGAGCCAAAGAGAGAAATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177807 translation initiation factor eIF-5B [Arabidopsis thaliana]12604e-136
AAF04442 putative translation initiation factor IF-2; 73082-68138 [Arabidopsis thaliana]12604e-136
XP_002889098 hypothetical protein ARALYDRAFT_895554 [Arabidopsis lyrata subsp. lyrata]10274e-109
AAF04435 putative translation initiation factor IF-2; 35582-30916 [Arabidopsis thaliana]9281e-097
XP_002889103 hypothetical protein ARALYDRAFT_476840 [Arabidopsis lyrata subsp. lyrata]9272e-097

Swiss-Prot top hits (Blast detail)Scoree value
P36044 Protein MNN41883e-013
Q0UJJ7 Stress response protein NST11831e-012
P39730 Eukaryotic translation initiation factor 5B1812e-012
A5E4P1 Protein PXR11751e-011
Q01042 Immediate-early protein1741e-011

TrEMBL top hits (Blast detail)Scoree value
Q9SRD2 Putative translation initiation factor IF-2; 73082-6813812603e-136
Q9SRE1 Putative translation initiation factor IF-2; 35582-309169288e-098
Q8GUM6 Putative translation initiation factor IF-2 (Fragment)8311e-086
B9SQ25 Translation initiation factor if-2, putative8176e-085
Q9SRD1 Putative translation initiation factor IF-2; 74568-789727881e-081

Arabidopsis top hits (Blast detail)Scoree value
AT1G76810.1 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein12628e-139
AT1G76720.1 GTP binding / GTPase/ translation initiation factor8272e-088
AT1G76820.1 GTP binding / GTPase8173e-087
AT1G21160.1 GTP binding / GTPase/ translation initiation factor4697e-047
AT1G56660.1 unknown protein2376e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  40%
 
92  40%
 
181  20%

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