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Information for unigene UN11681
| FASTA Sequence |
| Unigene ID: UN11681 | Length: 1662 |
SSR | | AAAGTAATAATAATCTTTGAATTTCAAGAGGATAAATACAAAATGTCTTTTTCGTTGTGAACACTATAAGAGTTCTCTCTACACAT
TGTTGTACGATGACAATATTCAATCATTAGACAAGACTTAGCTCATCTGAAGGAGAAAGCTTCTTGTTTAGCTCAGCTAGTTCCTC
ACCGGCGTCACAGATGTATGACGAAGCTTGTCTCCCTGACAATGTTGCTCCTTCCATACTATCTATGTAATCCTGCTTTGTGTATG
AACCAGCGAGGAAGAAGTTCTTTACGGGAGTCTTCTGATCAGGTCTGAATGGATCTTTGCCTGGTGCTTCACGGTACAGAGACTGA
GCTATTTTGACAACTGATGACCAGGTTACTTCTAGACCACGCGACGATGGAAACAGCTCTGTGACCTGCATTGCTACTTTCTCTAT
GATCTTATCGTTCGTTAATCTCATGTAGGGATCTCCTGGCGTCAAAACGCACTGAAGCAGAGAGCCTTGTCCTTCAATGTAATAAT
CAGCAGGCGAAGCGAGCGCAAGATCCGCAAAGCATGAGAAATCAGCATCAGGAGTGTAGAGAAGGTTATCTAAACCAACCGCTCGT
TTCAACTGCCTGGAAAGTTCAATGTCGTGTAACTCAGTGACCCAGCCATTGTATCTGAGCTGCACCGTACAGACCGGTACTCCCTC
TAGTTCGTATATATCGTTGAAGAAACGAGATTCTCGCCATTCTTTGGGAAGTAGCCTTTTGATTCCCGGTACATCACACGCTGCAA
CATACACATCAGCTTTCACAATCTTCTTGTCCGTAGCCTTGGAAACTGCTAGTCCTGTGACATAAGTTTCTCCATCTGCTGATTTA
TCATAAAGTATCTCCCTGCAACCCCACCTTAGATGGATTCTGCCACCTCTATCTGTGATGTATTGTTTGATAGGACCACTCAAGTA
AACATCAGGGGAGCCCTTGAGCATACGCAACAAAGAAGCTTCTGTTTTGGTGGCGAACAATGAGAATATGGTAAGCATGCATCTTG
CACTCATGTTATCGCAGTCTATGAAACCGAGTGCGTACGCAACAGGATCCCACATTCTCTGGATACTCTCCCTCGTCCCACCTTTA
GAGAGGAACCAATCCGAGAAACTTATGCTGTCTAGGTTGCGAATGTCTTGCATTGCTCCATCGGGGTTAACGAGAGCTTTAACGAC
AGGGCTCAATGCAAGAGCTAGTGAGTTCCTCAGCTTGTCATATGGCTTGAGTTGATTTGTTACTAAAAAGGCGCGGATACCGTGAA
TTGGAGCTCCAACAGGAAACCGAAAATCAAGCTCTCCAATTTCGCTGCCTTTGTTTATAAATGTATGAGTGTGGTCTTTGACAAGA
AGGTTCTTATCAGCTCCAACCTTTTTCATCAAGCGGAAGAGATTGTTATAGCATCCGAAGAAGACATGTAGACCCATCTCGATGTG
GTTGCCTCGTCTATCTACAAACGAACCAACTTTGCCACCAATGAAAGTCCTTGAATCATATATATCCACCTCGTGACCCTGATCGA
GAAGCTCAACAGCAGTAGAGAATCAATCAACTTTTGTCGTGAAGATGATGATGATGATGTGCTTTCCTTTCACTCCGCATAGACTC
TGTGGCCTAACTGTGGCCAGTGGGATAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACM68701 zeta-carotene desaturase [Brassica rapa subsp. pekinensis] | 2471 | 1e-276 |
| NP_187138 zeta-carotene desaturase [Arabidopsis thaliana] | 2432 | 5e-272 |
| AAM63349 putative zeta-carotene desaturase precursor [Arabidopsis thaliana] | 2432 | 5e-272 |
| XP_002882378 zeta-carotene desaturase precursor [Arabidopsis lyrata subsp. lyrata] | 2420 | 1e-270 |
| AAF85796 zeta-carotene desaturase precursor [Arabidopsis thaliana] | 2412 | 1e-269 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38893 Zeta-carotene desaturase, chloroplastic/chromoplastic | 2432 | 2e-273 |
| Q9FV46 Zeta-carotene desaturase, chloroplastic/chromoplastic | 2173 | 2e-243 |
| O49901 Zeta-carotene desaturase, chloroplastic/chromoplastic | 2165 | 2e-242 |
| Q9SE20 Zeta-carotene desaturase, chloroplastic/chromoplastic | 2161 | 6e-242 |
| Q9SMJ3 Zeta-carotene desaturase, chloroplastic/chromoplastic | 2154 | 4e-241 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9VUW3 Zeta-carotene desaturase | 2471 | 1e-276 |
| Q8LD88 Putative zeta-carotene desaturase | 2432 | 3e-272 |
| B9MZG1 Predicted protein | 2231 | 7e-249 |
| C1KC69 Zeta-carotene desaturase | 2211 | 1e-246 |
| B9RES0 Zeta-carotene desaturase, chloroplast, putative | 2204 | 9e-246 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G04870.1 ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase | 2433 | 1e-274 |
| AT3G04870.2 ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase | 2433 | 1e-274 |
| AT4G14210.1 PDS3 (PHYTOENE DESATURASE 3); phytoene dehydrogenase | 537 | 1e-054 |
| AT4G14210.2 PDS3 (PHYTOENE DESATURASE 3); phytoene dehydrogenase | 530 | 6e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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