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Information for unigene UN11683

FASTA Sequence
Unigene ID: UN11683Length: 968 SSR 
GCTGAGACGAGTAGTAGTATATATAAATCAACTAGAGGTTGAGAAGCAAGCTCTTTTATGTGCAGCAGGTCCATGTAAAGGCAACA
ACTTACATATTTACAGCAGACTTTTGTGCAATCAATAGCGGACACTATCACTATAATTTTGAAAAGATGCTTAGAACTATTTGCAG
GCAGCTGTAACCTGTCCCTCTCTCTCTCTCTCAGTAGCCGAACAGCTGTTTTTGCAAAGGTAGGGAGAAGTAAGAAAACTAAGAGA
TTCACCACATTAGTCTTGACTTGCGAGGCAACTGCTTTCTTGTGATGCACCACGGACCAGGAAAGGTGCTTAAGTTACTGATAAGC
TTTGCCCCATGCCACGCTGTGTCCACGCCACAGGGAGGAGGGATTACTCTGACTCCGTTGCATATAGATGAAGGAAGATATTCATG
CAGTTCTTTCTCTAGTCTTTCTGCAAGCCCTGGCAAAGATGCGCTTCCTCCAGCCAATACTACAGTCTTGAACCAGCTACCATCAC
CTGTCGTAATTCCTGCTGCATCACAGTGGTCCATACAGAGCGCGACTCCCTGTTGCAACCCCATTGCCCGCATTCCAGCAAGACGT
GGTTGGAATAGTATCTCCCCAATTTGAAAACGCTTCTTTGACAAAGTAGCCGCACTTTCTTGTGCGTCTCTTGAGAGTTCAGCTTC
ATAATCGAGAGCCACATAACACTCTTTTAGAGTTTGAACAGCGAGGAGCGATAGGGTAATGTTTTTCTCTTGCATTTTCTCTTTAA
GAAAGCCCGTGAGTTTCGATGCTCCAAAACCAATGACTTCTACACCCACCTGCCGCATCACCTTCCCATGCAAAATTGGGACAATG
GTTATGACTTGGAAACCAATGTTAACAACAATTCCAGATGTCTGCTGTGCAGCATATAGAGCTAAAACAGCCTGATTAACTGCACA
CACGGCAGGAACAATCATATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002300588 actin related protein [Populus trichocarpa]8094e-084
XP_002264128 PREDICTED: hypothetical protein [Vitis vinifera]7979e-083
XP_002866129 hypothetical protein ARALYDRAFT_495706 [Arabidopsis lyrata subsp. lyrata]6491e-065
NP_568836 actin-related protein 8 [Arabidopsis thaliana]6231e-062
CAN62263 hypothetical protein VITISV_013986 [Vitis vinifera]5048e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKT0 Actin-related protein 89623e-103
A8WAT2 Actin-related protein 87331e-076
Q7XR80 Actin-related protein 87331e-076
Q99023 Actin1433e-008
P20904 Actin1371e-007

TrEMBL top hits (Blast detail)Scoree value
B9GHK1 Actin related protein8092e-084
A5CAW6 Putative uncharacterized protein5046e-049
B9GHJ8 Actin related protein4859e-047
C5YA12 Putative uncharacterized protein Sb06g032115 (Fragment)4795e-046
B4FT07 Putative uncharacterized protein4652e-044

Arabidopsis top hits (Blast detail)Scoree value
AT5G56180.1 ATARP8 (ACTIN-RELATED PROTEIN 8); structural constituent of cytoskeleton9632e-104
AT5G56180.2 ATARP8 (ACTIN-RELATED PROTEIN 8); structural constituent of cytoskeleton4882e-049
AT5G09810.1 ACT7 (ACTIN 7); structural constituent of cytoskeleton1738e-013
AT3G12110.1 ACT11 (actin-11); structural constituent of cytoskeleton1711e-012
AT1G49240.1 ACT8 (ACTIN 8); copper ion binding / structural constituent of cytoskeleton1603e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
121  50%

Unigene MembersMember information