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Information for unigene UN11711
| FASTA Sequence |
| Unigene ID: UN11711 | Length: 1334 |
SSR | | CTTTTAGAAACCAAACTTATTTTATAGACGAACTGAAACATCATTCACAGCCCACATTAATGTCTCTCCTTGCTTCTCTATTTTTA
CAAACATTCGGCAAAACATAATAATAATTGAATAAGGTATTACATACAGGAAAATATAAGTTGTTCTACAGGGACCAAGCCCTAGA
CAAAAAGAAGCCACACACACACACAAGCAATTTCACTTATTACATAACACTTGTCGAGTTAAAAGCAAAAGAGACTTGAGAACAAC
GAGCAATGCGGAGAGACTTACGAGGAGGAGGAGGAAGGTGCAGTCGAAGGGTTAAATGGTTTCTGCTCAGCGCAGCTGAGCTCCTC
GTTAGGCCCCGCGTCTTCTCTTCCGATACCCAAGAGATCAAGGAAGTACAAGTAGTGCGAGACAATGTTGTTCATCGGCTCAATGT
TACCTTGACCGCACGTGTACTCTCCGTACAAGACGTTCATGGTGGTGCCAAAAGTCGGTCCACGTTTGGACAGAGTATCGTTCTTC
GTCGGTTTCCAGTTTCCAACGAAGATATCGTGAGCTGAAGGCTGAGCTTTCTTGATCGGTGTCATCCATCTCCAGATGGCAGCTTG
GAAGGCAAGCGTGGCGTTCTGCTCGATGTACTCGGGGTGGTTCAAGAGATCGGCTTTTAATGCTTCACCTGCTGCACCGTAGTTGA
AGTTCCAGTAAATGGGTAAAGCACCACGTCCGTAGTATTCAGCTCCAGGGCTGCAAGGGTACTTGTACTTCCAGGTCTCGTCACAG
TAAGATTGCATTGGGCTCATCTCCCTGTTGTAGCACAGACCCCAAGCCAAAGGCCCTCCTGTTGCAACTCCATAGCCACATGACGT
TTTGCTGGCGACATGGCCGAGGAAGGCAGCCATTTCTTTCTGTCCCATGAGCTTTCCACCAGTGGTACCGAACCCAAGAGGCTCGT
AGAGAGCAGCCGCGGTGATGAAAGACTGGTAGTCCCAGAAACCAACAGCATGAGCAATGGGAGTGTTTCTTTTGGCGAAGAGCTGC
TCGAACTGATACACCTGGAAGTAATCGGAGATCGTCTCGTTACAGCAGTACTGAGACCACCAGACGCATTCCCATCCCTGAGTGCA
CACCTTCTTTCCCTTCACCTTCTTCACTTTAATCGTTTTGTCTTCCCCATTTGCAACCAAAGCCAGGGTTGAGACAGCCAGCAGAA
CTAGAATAAAGACCGAAGCGCTCCGGATCGTCACCATAGCTTTACAACCTGCAATGCCGATAAGCTAGATCTAGAGAGACCGAGAG
AAAAAACTAGTTGAGCTTCAATGGGAACAAAAACTACTTCTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABV89660 chitinase [Brassica rapa] | 1721 | 1e-189 |
| NP_172076 chitinase-like protein 1 [Arabidopsis thaliana] | 1675 | 2e-184 |
| XP_002892310 pom-pom1 [Arabidopsis lyrata subsp. lyrata] | 1674 | 3e-184 |
| BAH30273 hypothetical protein [Arabidopsis thaliana] | 1669 | 1e-183 |
| BAJ33659 unnamed protein product [Thellungiella halophila] | 1569 | 4e-172 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9MA41 Chitinase-like protein 1 | 1675 | 9e-186 |
| Q9LSP9 Chitinase-like protein 2 | 1219 | 7e-133 |
| P06215 Endochitinase | 488 | 4e-048 |
| P36361 Endochitinase CH5B | 487 | 5e-048 |
| Q7DNA1 Chitinase 2 | 486 | 7e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXW1 Chitinase | 1721 | 7e-190 |
| A8IXW2 Chitinase | 1348 | 1e-146 |
| B9RPJ5 Chitinase, putative | 1339 | 1e-145 |
| Q7X7Q1 Class VII chitinase | 1338 | 2e-145 |
| A5B1C7 Putative uncharacterized protein | 1312 | 2e-142 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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