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Information for unigene UN11735

FASTA Sequence
Unigene ID: UN11735Length: 612 SSR 
CTCGCAGTTTAGGGACAGCAATCACTTGGCGTCATCACTTCAACAGCAGAATGAACACTTAGCAGCATGGCATCAAGGACAACAGT
CCAGCTCGCGTGTGGTTCCAGGAAGCGGATATTACAGCCTTCCTAGTCATCAGAATCAACAGCCTCCTGGTTTCCGTCAAGCACAA
CTACTGCAGCAGGCATTTCAACAACAACAACAACAGCATTTTGGAGGACATGGCTATGGGAGTCCTTACCATTCACAAGCACTAGA
TCATCTCCATCACCAACACCAACAACAACAAAACGCCAGAGATGCTTCTAAACGGACCCCCCACCAACAGTTATGGCCCAACAACT
ACTGATCAAGAATCAATCAGTCAAATCCTGTCTTCATGCCTTGCTTTTTCTTTCTCCTTGCAATGGGGGATGATTCCGAGGTGTGG
GTGTGTGTGTTTGTGTGTGTTTTGGATTGTTGTGGTTTGTGGTAAGGTCTTATGAAGGGTTTAGGTGAGAGAGACCTTCAGTGGCT
GGCTTGTTTAGATGCTAACCAACCTTCTTGTATCACTAGAAACTCTGTTTTTTCCTTACCAATTAACTCATGACTCATCAGTCTTG
ACTTCCTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870069 predicted protein [Arabidopsis lyrata subsp. lyrata]5043e-049
NP_193549 uncharacterized protein [Arabidopsis thaliana]4462e-042
CAB53656 hypothetical protein [Arabidopsis thaliana]4443e-042
NP_001056347 Os05g0566900 [Oryza sativa Japonica Group]1308e-006
EEC79711 hypothetical protein OsI_21014 [Oryza sativa Indica Group]1308e-006

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SVV7 Putative uncharacterized protein AT4g181504442e-042
B8AWS4 Putative uncharacterized protein1305e-006
Q688W7 Os05g0566900 protein1305e-006

Arabidopsis top hits (Blast detail)Scoree value
AT4G18150.1 unknown protein4469e-045
AT1G29350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: kinase-related (TAIR:AT1G29370.1); Has 13611 Blast hits to 7582 proteins in 387 species: Archae - 0; Bacteria - 354; Metazoa - 5683; Fungi - 1538; Plants - 892; Viruses - 68; Other Eukaryotes - 5076 (source: NCBI BLink).1842e-014
AT1G29370.1 kinase-related1842e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
101  50%

Unigene MembersMember information