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Information for unigene UN11757
| FASTA Sequence |
| Unigene ID: UN11757 | Length: 1288 |
SSR | | GGAAGAGGACTGAGAAAGGGGAGCTTTCTATATGTGTGAGTTCTTTTTCAATACCCACAAAGTCTCTACTTCCACTGCCAGACAAG
TATCATGGTCTAACTGATATTGATAAACGTTACCGCCAGCGCTATGTGGATATGATTGCTAATCCTGAAGTGGCTGATGTGTTCCG
CAAAAGAGCAAAAATAGTTTCAGAGATACTCAAGACAGTCGAGTCTTCTGGATATTGGAGGTTGAGACTCCAGTTCTTCAGGGAGC
AGCAGGTGGAGCCGAAGCAAGACCCTTTGTAACGTATCATAACTCACTTGGAAGGGATCTCTACCTGAGGATTGCAACTGAGCTTC
ACTTGAAAAGAATGCTGGTTGGAGGGTTTGAGAAAGTGTATGAAATTGGTCGTATATTTAGAAACGAAGGCCTTTCCACACGTCAC
AATCCTGAATTCACTACCATTGAGATGTACGAAGCTTTTTCGGACTACCAAAACATGATGGACATGGCAGAACTAATCGTCACTGG
ATGTGCAATGGCAGTTAATGGGAAGCTAACACTTGATTACCAGGGAACAGAGATCTGCCTCGAGCGGCCTTGGAGGAGAGAAACCA
TGCATAGCCTCGTTAAAGAGGCAACAGGAATCGATTTCAATGAGCTAGGGGAAGATCTCGGAAATGCTAAAGACACAGTTCTGCTG
GCACTTCAAGACGTGCCTGTTGTAGAGCCAAAGCTTGTGCAGCCAACTTTTGTATTGGACTACCCAATCGAGATATCTCCCTTGGC
CAAGCCACATCGCTGTAATGCAGGTTTGACTGAAAGATTTGAGCTGTTCATCTGTGGCCGTGAAATGGCAAACGCATTCTCTGAAT
TGACTGATCCTGTGGACCAGAGGAGACGGTTGGAAGAGCAAGTAAGGCAGCATAACGCAAAGCGAGCAGCGGCTGCATCAGAGACT
CCTGAGCAAAAGGCAAAGAAAGATGATGATGATGATGACGATTCATATGAAGTGACACTAGACGAAGACTTTCTCACTGCCCTGGA
ATACGGAATGCCTCCTGCCTCTGGAATGGGCCTTGGTATTGACAGGCTGGTGATGCTGTTGACAGACTCTGCGAGTATAAGAGACG
TCATTGCGTTTCCTGTTCTGAAAGTTCAGCAGTAACACTTATGCTGAACTTGGTAATACATGTTCGTAGCTTTAGCATTCTTTGTG
TATCTTTTTTTTTGGTTATTTCTCCAGCAGTGGAAGTTGGAAGAAGCATGTGTAACATTTAGATAGCGAAAACAAATCCAAAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_681003 lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] | 948 | 4e-100 |
| XP_002884969 hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp. lyrata] | 789 | 1e-081 |
| NP_187958 Lysyl-tRNA synthetase, class II [Arabidopsis thaliana] | 784 | 4e-081 |
| XP_002963210 hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii] | 783 | 6e-081 |
| XP_002523412 lysyl-tRNA synthetase, putative [Ricinus communis] | 728 | 1e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8DMA9 Lysyl-tRNA synthetase | 948 | 2e-101 |
| Q7UZP0 Lysyl-tRNA synthetase | 819 | 2e-086 |
| B0K5C0 Lysyl-tRNA synthetase | 810 | 2e-085 |
| B0KCE4 Lysyl-tRNA synthetase | 806 | 5e-085 |
| P73443 Lysyl-tRNA synthetase | 662 | 3e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2JLD1 Lysyl-tRNA synthetase | 875 | 8e-092 |
| Q9LJE2 Lysyl-tRNA synthetase | 784 | 3e-081 |
| B9SBP3 Lysyl-tRNA synthetase | 728 | 9e-075 |
| A5BPH5 Lysyl-tRNA synthetase | 695 | 6e-071 |
| Q6K1T2 Lysyl-tRNA synthetase | 682 | 2e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13490.1 OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | 784 | 2e-083 |
| AT3G11710.1 ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | 447 | 2e-044 |
| AT3G30805.1 ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleotide binding | 132 | 7e-008 |
| AT4G33760.1 tRNA synthetase class II (D, K and N) family protein | 129 | 1e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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