Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN11780

FASTA Sequence
Unigene ID: UN11780Length: 781 SSR 
GGGGCTTACCAGGTACTTTAACTGCTCTCTTCTCAGGGCCTCAGGCTCATTATTTTCTCTGCAGATTAACTGCAGAAGAAGAAGAA
GAGAAACAAGATCCGATATCTTGGCTCATAGTAATCCATTAGTCCATTAAAATTTTCATAAAAGATGGGGTTTTGGTCATTGTTGG
AGGTGGCTTCTATGCCAGTGATTCAAGTCCTCATCATAAGTCTTGTTGGAGCTTACTTGGCCTCTGATCGATGCAAGCTCTTTCCT
GTTGAAGCCCGCAATTCCATGAACAAGGTGGTGTTTGTAATATTTGCACCGGCTCTCATGTTTGCAAATCTAGCCCAGACGGTCAC
ACTTCAAGACATGATCTCATGGTGGTTTATGCCGGTGAATATGGGACTTACATTCTTAATCGGAGGACTTCTTGGTTGGATGGTTG
TCAAGATTCTGAAACCACCTCCTTATCTTGAAGGTCTTATTGTTGCAACTTGTTCTTCAGGAAATATGGGGAACCTACCAATCATA
CTTGTCCCAGCAATCTGCGACGAGGACAAGAGTCCATTTGGTAACCGTAGTGTATGCAGAACCGTTGGTCTCTCTTACGCGTCTTT
CTCCATGGCGCTAGGGGGTTTTTACATATGGACTTACACATTCCGGCTTATAAAAGGGTCGGCAATGAAGTTCAAAGACATGGAAG
ATCTGAGAGAGAGCATAAATCATCCATAGTGACTTAGAGGCTGATCACAAAACCAAACTTCTAGTGCACCTGAGACGAGCTGGTAA
AGGAGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884062 auxin efflux carrier family protein [Arabidopsis lyrata subsp. lyrata]8891e-093
AAM60930 unknown [Arabidopsis thaliana]8836e-093
NP_565417 auxin efflux carrier-like protein [Arabidopsis thaliana]8836e-093
BAH19704 AT2G17500 [Arabidopsis thaliana]8836e-093
NP_201399 auxin efflux carrier family protein [Arabidopsis thaliana]7133e-073

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B9DG37 AT2G17500 protein (Fragment)8834e-093
Q8LGC5 Putative uncharacterized protein8834e-093
Q9SHL8 Expressed protein8834e-093
Q9FKY4 Gb|AAD32907.17132e-073
B9S6X0 Auxin:hydrogen symporter, putative7089e-073

Arabidopsis top hits (Blast detail)Scoree value
AT2G17500.1 auxin efflux carrier family protein8833e-095
AT2G17500.3 auxin efflux carrier family protein8833e-095
AT2G17500.2 auxin efflux carrier family protein8833e-095
AT2G17500.4 auxin efflux carrier family protein8833e-095
AT5G65980.1 auxin efflux carrier family protein7131e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  33%
 
61  17%
 
71  17%
 
91  17%
 
101  17%

Unigene MembersMember information