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Information for unigene UN11815
| FASTA Sequence |
| Unigene ID: UN11815 | Length: 1413 |
SSR | | GGGAGCCCACACGTGTCGAGGAGGCGGGAAAACAAAGCTCATCGGCGCCGGAGAGACTGTGAGAGAGAAAGAGAGAGAGAGTCAGA
AACTTTCGCTCGCTGTCATCGCCATGGGTATCAAGGGTTTAACGAAGCTTTTGGCGGACAATGCGCCAAACGCAATGAAAGAGCAG
AAATTCGAGAGCTACTTCGGTCGGAAAATCGCAGTTGATGCAAGCATGAGCATTTACCAGTTCCTTATAGTGGTGGGGAGAACTGG
GACTGAGATGCTCACCAATGAAGCTGGTGAAGTCACTAGCCATTTGCAAGGGATGTTTAATCGAACCATTCGTCTTCTCGAAGCTG
GAATCAAGCCTGTCTATGTTTTCGATGGGAAGCCCCCGGAGTTAAAGAGGCAAGAACTAGCGAAACGTTACTCCAAGAGAGCTGAT
GCAACTGCAGATTTGACCGGTGCAATTGAGGCAGGAAACAAGGAGGACATTGAGAAGTACAGCAAACGAACTGTGAAGGTGACAAA
GCAACACAATGACGACTGCAAAAGACTCTTGAAACTCATGGGGGTTCCCGTTGTTGAGGCCACTTCCGAAGCAGAAGCGCAATGTG
CTGCACTTTGCAAAGCATGAAAGGTGTATGGTGTGGCTTCTGAAGATATGGACTCCTTAACTTTTGGAGCTCCTAAATTTCTTCGC
CACCTGATGGATCCTAGCTCCAGAAAGATCCCTGTCATGGAATTTGACATTGCCAAGATTTTAGAGAGCTTCACTTACCATGGATC
AGTTCATCGACTTGTGCATATTGTCCGGATGTGACTATTGTGACAGCATCCGAGGTATTGGAGGGCTGACTGCCCTAAAGCTTATT
CGCCAGCATGGATCTATTGAGGCTATCCTCGAAAATATAAACAAAGAAAGGTATCAGATACCTGAGGAATGGCCATATAATGAAGC
TCGTAGACTTTTTAAAGAACCTGATGTCTTAACTGATGAAGAGCAGCTTGATATCAAGTGGACCTCTCCAGATGAAGAGGGTATCG
TTCAGTTTTTGGTGAATGAAAATGGATTCAACATTGATAGGGTAACCAAGGCGGTAGAGAAAATCAAATCTGCAAAGAACAAGTCA
TCCCAGGGAAGGCTGGAGTCATTTTTCAAGCCAGTCGCTAGCTCATCTGTGCCTGCCAAAAGAAAGGATGTCCCGGAGAGTAACGC
TAAAGGAGCAGCAAATAAGAAAACCAAGGGAGGTGGTGGGAGGAAGAAGAAGTAAATCACGGTCCAAGCTGTGACAAGACTGTATA
AGTAGTCTGTTTGCTTTTCTCTGTTTCAGTAATTGTTGTTAAGACTCTGCTTTCGCTGTGGTAGAAAATTTATTCAGGTTTGGACT
TCATTTGCATCTTTATGGTTCATGTGAAGGTATGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_850877 flap endonuclease-1 [Arabidopsis thaliana] | 1058 | 8e-113 |
| NP_001154740 flap endonuclease-1 [Arabidopsis thaliana] | 1058 | 8e-113 |
| XP_002874315 hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp. lyrata] | 1058 | 8e-113 |
| C6TEX6 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap structure-specific endonuclease 1 | 990 | 7e-105 |
| XP_002278964 PREDICTED: hypothetical protein [Vitis vinifera] | 986 | 2e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SXQ6 Flap endonuclease 1a | 940 | 2e-100 |
| Q75LI2 Flap endonuclease 1b | 772 | 5e-081 |
| P39748 Flap endonuclease 1 | 684 | 8e-071 |
| Q58DH8 Flap endonuclease 1 | 681 | 2e-070 |
| P70054 Flap endonuclease 1-B | 672 | 2e-069 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TEX6 Putative uncharacterized protein | 990 | 4e-105 |
| B4FHY0 Putative uncharacterized protein | 953 | 9e-101 |
| C5YUK3 Putative uncharacterized protein Sb09g026950 | 951 | 1e-100 |
| B6THM0 Flap endonuclease 1a | 946 | 6e-100 |
| B8AW67 Putative uncharacterized protein | 940 | 3e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G26680.1 endonuclease, putative | 1058 | 3e-115 |
| AT5G26680.2 endonuclease, putative | 1058 | 3e-115 |
| AT1G29630.1 nuclease | 147 | 1e-009 |
| AT3G28030.1 UVH3 (ULTRAVIOLET HYPERSENSITIVE 3); DNA binding / catalytic/ endonuclease/ nuclease/ single-stranded DNA binding | 134 | 4e-008 |
| AT1G29630.2 DNA binding / catalytic/ nuclease | 126 | 4e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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