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Information for unigene UN11816
| FASTA Sequence |
| Unigene ID: UN11816 | Length: 966 |
SSR | | GCTGCTTCTAGATGTCACTCCTCTTTCGCTTGGTATTGAAACACTTGGTGGTGTCTTTACAAGATTGATTGGCCGAAACACAACCA
TCCCCACGAAGAAGAGTCAGGTGTTCTCAACTGCAGCAGACAACCAGACGCAAGTAGGGATCAGAGTGCTTCAAGGAGAGCGTGAA
ATGGTATCAGACAACAAGCTCCTGGGAGAATTCGATCTAGTGGGCATTCCACCATCTCCAAGAGGCATCCCTCAGATCGAAGTAAC
GTTCGACATAGACGCAAACGGCATTGTCACTGTTTCCGCCAAGGACAAGACGACCGGCAAAGAGCAACAGATTACAATCCGGTCAT
CAGGTGGGCTCTCGGAGGATGATATCCAGAAGATGGTGAGGGACGCAGAGTTGCACGCTCAGAAAGACAAAGAGAGAAAAGACTTG
ATCGACACCAAGAACACAGCCGACACGACGATTTACAGCATAGAGAAGAGCCTCGGTGAGTACAGAGAGAAGATCCCAAGTGAAGT
CGCCAAGGAGATTGAAGATGCTATTGCGGATCTGAGGACCGCTTCGTCTGGAGATGATGTCAATGAGATTAAGGCCAAGATCGATG
CTGCAAACAAAGCTGTCTCAAAGATAGGAGAGCACATGTCTGGTGGAGGTTCTGGTGGGGATTCAGCACCAGGAGGAGGAGGAGGA
GCTCAGGGAGGCAGTGATCAAACTCCAGAGGCTGACTACGAGGAAGTGAAGAAGTGAAGTGTCTGCTTAAATTCTTGTGGGTTTGG
GTTTAAAGAGATTAGGTTAGATGATGGTTTGATTTCTATGTTCCAAGGAAACCTTTGCCTTATGAAATGGATCTCTTTCTGGAATA
AGCTTTTGTAATGAACGAAACTCATTTGGAGTTTTAACTTGCGTTAATGTTCCTCTTTTGTTGTGGTGACGTGTTTTAAACGTTTA
TCAGCTAACCGTTTAAGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34398 unnamed protein product [Thellungiella halophila] | 1138 | 3e-122 |
| XP_002871379 mthsc70-2 [Arabidopsis lyrata subsp. lyrata] | 1135 | 6e-122 |
| NP_196521 mitochondrial HSO70 2 [Arabidopsis thaliana] | 1114 | 2e-119 |
| Q01899 RecName: Full=Heat shock 70 kDa protein, mitochondrial; Flags: Precursor | 1053 | 2e-112 |
| ACO71287 heat shock protein 70 [Triticum aestivum] | 1040 | 6e-111 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q01899 Heat shock 70 kDa protein, mitochondrial | 1053 | 8e-114 |
| P37900 Heat shock 70 kDa protein, mitochondrial | 993 | 7e-107 |
| B6IVA4 Chaperone protein dnaK | 781 | 3e-082 |
| Q2VYT1 Chaperone protein dnaK | 777 | 8e-082 |
| Q57AD7 Chaperone protein dnaK | 764 | 3e-080 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LDZ0 At5g09590 | 1114 | 1e-119 |
| C3V133 Heat shock protein 70 (Fragment) | 1040 | 4e-111 |
| B9GJ14 Predicted protein | 1023 | 4e-109 |
| C5WVD3 Putative uncharacterized protein Sb01g017050 | 1021 | 6e-109 |
| B4FXX3 Putative uncharacterized protein | 1018 | 1e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G09590.1 MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | 1129 | 1e-123 |
| AT4G37910.1 mtHsc70-1 (mitochondrial heat shock protein 70-1); ATP binding | 950 | 6e-103 |
| AT4G24280.1 cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding | 659 | 4e-069 |
| AT5G49910.1 CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2); ATP binding / unfolded protein binding | 631 | 6e-066 |
| AT5G02490.1 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) | 547 | 3e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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