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Information for unigene UN11843
| FASTA Sequence |
| Unigene ID: UN11843 | Length: 1397 |
SSR | | GGATTCTGGTCTTCTCTCTCTCTCTCTCTGCCCTTCCTTCACTCACTCACTCACGTTTAAGCTCTTTACCTCGACGACGCTGCATC
TGTGAGGCTCGCTCTTTCTGCTGTAACTGCAATCATGTCGACTATTATGCAGAAGATCAAAGAAATCGAAGATGAGATGGCAAGGA
CTCAGAAGAACAAAGCCACCGCTCACCATCTCGGTTTGTTAAAGGCCAAACTTGCTAAGCCACCTAATCTCACATTCAGGAAAAAA
GACAAAGGTGGTATCAATTTAACTTCCACAGTCACCTGCACGCACCTTGACCTCGACACTGTCAAGGCCATAAAGCCAATAACTCA
CAAGCGTCTCATTGAAAAGGAGCTTGAAGGATTCGGAATTAGGTTGAACAAGGAGCCACCTAATCCACCCTCTTGAACAAGCTCAC
TGGAACCTTTTCCGAGGTTGCTTCTTATGAGTTCACAACACTGACATGCATTCCCGGTGTTATTACATACCGTGGAGCTAAAATTC
AGTTATTGGATCTTCCTGGTATTATTGAGGGTGCCAAAGACGGAAAAGGTAGAGGACGACAGGTTATAAGTACTGCTAGGACTTGC
AACTGCATCATAATAGTCCTTGATGCCATATGCAGTGAGTACAGGATGCACAACGCCGATATCACTCTGCGCTACGATGCAACTGC
TGATGACCTCATCGAGTCATTGAGGGCAGTCGCATCTATATGCCCTGCATCTATGCCGTCAACAAGATCGACCAAATCACTCTCGA
GGAACTTGAAATTTTGGACAGACTTCCTCATTACTGTCCTGTCAGTGCGCATCTGGAGTGGAATCTTGATGGTCTTCTCGATAAGA
TATGGGAATACTTGGATCTTACTAGAATCTACACCAAACCAAAGGCAATGAATCCGGATTACGATGACCCTGTCATCTTATCTTCC
AAGAAGAGAACAGTTGAGGACTTCTGCATTCGGATTCACAAAGACATGCTTAAGCAATTCAAGTACGCTTTAGTATGGGGTTCGAG
TGCAAAACATAAGCCACAAAGAGTTGGAAGGGAGCACGAGCTCGAGGACGAGGATGTTGTTCAGATCGTTAAAAAGATATGAGTTC
GCCAGTAGTTCATGGAGAAGGCAAGAGACCAAAGCACAGCCCCATTATGTGATCTGTACACGTGGTAGAAGGTTAGGATCTTCTTT
TGGATTCTCTGCTTATCTTTTGGACTCCTTTTCTGTGTATTGTCATTATCAGATAAAACAAACTGTCTTCACTTTTTAAGTTGTCT
TGTTGGATAATCTTATCGTTTGCCAATGACTATGAGAGTATGTCATGTGATGAATGTTTTGTCAGACCACCTCCAAATAAAAAAAA
TACAGATGTGGTTTTGCCTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195662 GTP-binding protein-relatedlike protein [Arabidopsis thaliana] | 715 | 5e-073 |
| XP_002868910 hypothetical protein ARALYDRAFT_912415 [Arabidopsis lyrata subsp. lyrata] | 715 | 5e-073 |
| XP_002532275 developmentally regulated GTP-binding protein, putative [Ricinus communis] | 705 | 7e-072 |
| XP_002310030 predicted protein [Populus trichocarpa] | 693 | 2e-070 |
| XP_002279867 PREDICTED: hypothetical protein [Vitis vinifera] | 690 | 4e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54HP3 Developmentally-regulated GTP-binding protein 1 homolog | 514 | 4e-051 |
| Q3MHP5 Developmentally-regulated GTP-binding protein 1 | 511 | 9e-051 |
| Q9Y295 Developmentally-regulated GTP-binding protein 1 | 511 | 9e-051 |
| P32233 Developmentally-regulated GTP-binding protein 1 | 511 | 9e-051 |
| P43690 Developmentally-regulated GTP-binding protein 1 | 504 | 6e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SVA6 GTP-binding-like protein | 715 | 3e-073 |
| B9T206 Developmentally regulated GTP-binding protein, putative | 705 | 5e-072 |
| B9HG22 Predicted protein | 693 | 1e-070 |
| C6THI5 Putative uncharacterized protein | 684 | 1e-069 |
| D5ACC2 Putative uncharacterized protein | 679 | 5e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G39520.1 GTP-binding protein, putative | 716 | 1e-075 |
| AT1G72660.1 developmentally regulated GTP-binding protein, putative | 376 | 4e-036 |
| AT1G72660.2 developmentally regulated GTP-binding protein, putative | 376 | 4e-036 |
| AT1G72660.3 developmentally regulated GTP-binding protein, putative | 376 | 4e-036 |
| AT1G17470.1 ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase | 373 | 8e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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