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Information for unigene UN11854
| FASTA Sequence |
| Unigene ID: UN11854 | Length: 1251 |
| SNP | GGCTCAGTTAGCAGCAAAGACGATTCCAAATCCCATCCACTGCCTATCGATGCGCTTGACCATTGATTACTATCTTCTCACCGGAG
AAAAGAAAGTTCCCTCGCCGTGAAAACCGAGAAAACCCTAATCTTTATCACTATGCCCTCTTTTCTGACAATGTGTTAGCTGCTTC
AGTGGTTGTTAACTCAACCATCATGAATGCAAAGGATCCTTCTAAGCATGTTTTTCACCTTGTGACGGATAAACTCAACTTCGCAG
CAATGAACATGTGGTTCCTCCTAAACCCACCTGGAAAGGCAACCATACATGTGGAGAACGTGGATGAGTTCAAGTGGCTCAATTCA
TCTTACTGCCCTGTTCTTCGCCAGCTCGAATCTTCAGCAATGAAAGAATACTATTTCAAAGCAGATCACCCAAGCTCAGGCTCTTC
GAATCTCAAGTACAGAAACCCGAAGTACCTTTCCATGTTAAATCACTTGAGATTCTATCTCCCTGATCTTTATCCCAAGCTGAACA
AGATCCTGTTCTTGGACGACGACATCATCGTCCAGAAAGACCTGACTCCGCTCTGGGAAGTCAACCTGAACGGAAAAGTCAACGGT
GCAGTCGAAACCTGCGGGGAGAGTTTCCACAGGTTCGACAAGTATCTCAACTTCTCGAACCCTCACATCGCCAGGAACTTCAATCC
AAACGCTTGTGGATGGGCTTATGGGATGAACATGTTCGACCTAAAGGAGTGGAAGAAGAGAGATATCACTGGTATCTACCATAAGT
GGCAGAACATGAATGAGAACAGGACACTGTGGAAGCTAGGGACACTACCACCAGGATTAATAACGTTTTACGGACTAACACACCCT
TTGGACAAGTCGTGGCACGTGTTGGGACTTGGTTATAACCCGAGTATCGCGAAGAAAGACATTCAGAACGCAGCTGTGGTTCACTA
TAACGGGAACATGAAACCATGGTTGGAGTTGGCTATGTCTAAGTATCGACCGTATTGGACCAAGTACATCAAGTTTGATCACCCTT
ATCTTCGTAGATGCAACCTTCATGAATAAAATTAAATTATCAAATCGTTATTAGATGATTTGAGGTAATTACTCGTAATCTTATGT
TGTTTTCCCCATGGCGTTAATCTTTTATTTCTACACATTGTTTATTGTTTATTCATATCTTTCTTTAGTCATATTATTTTCTTACT
TTCGGGTTCAAAGCACTTTTGTTATTCCGAAGTTTAATCGATAATAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191672 alpha-1,4-galacturonosyltransferase 1 [Arabidopsis thaliana] | 1763 | 1e-194 |
| XP_002876594 GAUT1/LGT1 [Arabidopsis lyrata subsp. lyrata] | 1760 | 3e-194 |
| XP_002511763 transferase, transferring glycosyl groups, putative [Ricinus communis] | 1639 | 3e-180 |
| BAJ53137 JHL05D22.8 [Jatropha curcas] | 1634 | 1e-179 |
| XP_002320745 glycosyltransferase [Populus trichocarpa] | 1625 | 1e-178 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LE59 Alpha-1,4-galacturonosyltransferase 1 | 1763 | 5e-196 |
| Q0WQD2 Probable galacturonosyltransferase 3 | 1376 | 4e-151 |
| Q93ZX7 Probable galacturonosyltransferase 4 | 1305 | 7e-143 |
| Q9FWA4 Probable galacturonosyltransferase 9 | 1163 | 2e-126 |
| Q9LSG3 Galacturonosyltransferase 8 | 1146 | 2e-124 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RDH4 Transferase, transferring glycosyl groups, putative | 1639 | 2e-180 |
| B9IC41 Glycosyltransferase | 1625 | 9e-179 |
| B8BDU2 Putative uncharacterized protein | 1621 | 3e-178 |
| Q652K2 Glycosyl transferase family 8 protein-like | 1621 | 3e-178 |
| B9GPT1 Glycosyltransferase | 1619 | 4e-178 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G61130.1 GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 1764 | 4e-197 |
| AT4G38270.1 GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 1377 | 3e-152 |
| AT5G47780.1 GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 1305 | 6e-144 |
| AT3G02350.1 GAUT9 (Galacturonosyltransferase 9); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 1163 | 2e-127 |
| AT3G25140.1 QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 1146 | 2e-125 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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