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Information for unigene UN11863
| FASTA Sequence |
| Unigene ID: UN11863 | Length: 1119 |
SSR | | TTGGAAACGCCAGAGATGTCTCGTTTAGCTCGGGAACACGAGATCATGTCTCAAGAACGAGCCGCTTCTGCGTCTCGCGACGCCGC
GATCATCTCACTGATTCAGAAAATCACTGGCCACACCATCCAGTTACCTCCTTCTTTATCATCACAACCGTCTCCTCCTCCTCCGC
CGCCACCCGCAGCTAAACGCCCTTCATCACAACCTCAACTGCAACCAATAATGGCGATTCCACAGCAACAGGTCCTTCCTCCTCCT
CCTCCTCCTCAACCACAACAACAACAACAACAGCCACCACCACCACAACAACAAGAGATGATCATGAGCACGGATCAATCCTCGTC
ACCGTCGTCATCGCGATGGCCAAAGGCGGAGATTCTTGCGCTTATAAACCTGAGAAGCGGAATGGAACCGAGGTACCAAGACAATG
TCCCTAAAGGACTTTTATGGGAAGAGATCTCTTCTTCCATGAAGAGAATGGGATACAATAGAAACGCAAAGAGATGCAAAGAGAAA
TGGGAAAACATAAACAAATACTACAAGAAAGTTAAAGAAAGCAACAAGGAACGTCCTCAAGATGCTAAGGCCTGTCCTTACTTTCA
CCGCCTCGATCTTCTTTACCGCAACAAAGTACTTGGAACTGGTGGCAGTTCTAGCGCTTCCGGTCTACCTCAAGACCAAACATCAA
CAGTACAAAAGCAGAGTCCGGTCTCTGCAGTGAAGCCCCCACAAGGAGCTGTTGGGTCAGCTTCAAGTGAGGAAGAAGATGCTAGA
GAGGAAAGTCCACAAGGAACAGAGAAGAAGACCTTGTGATGAAAGAGCTGATGCAACGCCAACAACAAGAACAACAACAAGATTCA
ATGATAAGTGAGTACGAAAAAATTGAGGAGTCTCACAATTATAATAACATGGAAGAAGAGGAAGAAGAGGAAGAGGAGATGGATGA
AGAACTAGACGAGGATGAGAAATCTGCGGCTTATGAGGTTGCGTTTCAGAGCCCCGCAAACAGAGGAGGCAATGGCCATACCGAGC
CACCTTTCTTGACAATGGTTCAGTAAATCTGAATCACTGTTTCTGAATTGCCCTCGTCCCAAGAAAATGTACTTATGTGTGCATAG
T
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893757 hypothetical protein ARALYDRAFT_473497 [Arabidopsis lyrata subsp. lyrata] | 1022 | 9e-109 |
| Q9C882 RecName: Full=Trihelix transcription factor GTL1; AltName: Full=GT2-LIKE protein 1; Short=AtGTL1; Short=Protein GT-2-LIKE1; AltName: Full=Trihelix DNA-binding protein GTL1 | 853 | 4e-089 |
| CAA05995 GTL1 [Arabidopsis thaliana] | 839 | 2e-087 |
| AAG51283 trihelix DNA-binding protein (GTL1) [Arabidopsis thaliana] | 839 | 2e-087 |
| AAF97353 Putative GTL1 [Arabidopsis thaliana] | 839 | 2e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5TKR9 Histone acetyltransferase MYST3 | 179 | 2e-012 |
| Q8BZ21 Histone acetyltransferase MYST3 | 160 | 4e-010 |
| Q9ULL5 Proline-rich protein 12 | 143 | 3e-008 |
| P42858 Huntingtin | 140 | 7e-008 |
| P53832 Cell wall integrity and stress response component 2 | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O48590 GTL1 protein | 839 | 1e-087 |
| Q9C882 Trihelix DNA-binding protein (GTL1) | 839 | 1e-087 |
| Q9LP25 Putative GTL1 | 839 | 1e-087 |
| Q8L6Y5 At1g33240 | 767 | 2e-079 |
| Q7FPN7 GTL1 protein (Fragment) | 527 | 2e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G33240.1 AT-GTL1 (GT2-LIKE 1); DNA binding / transcription factor | 1076 | 2e-117 |
| AT1G76880.1 trihelix DNA-binding protein, putative | 538 | 5e-055 |
| AT1G76890.2 GT2; transcription factor | 401 | 4e-039 |
| AT5G47660.1 DNA-binding protein-related | 260 | 8e-023 |
| AT5G28300.1 trihelix DNA-binding protein, putative | 244 | 6e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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