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Information for unigene UN11869
| FASTA Sequence |
| Unigene ID: UN11869 | Length: 1035 |
| SNP | GAGTAAACCCTGATGAGGTTGTAGCTCTAGGTGCTGCAGTCCAGGCTGGTGTTCTTGCTGGAGATGTTAGTGACATTGTTCTTCTC
GATGTCACACCGCTTTCGATTGGTTTGGAAACTCTTGGAGGTGTCATGACTAAGATTATTCCAAGGAACTCCACTCTGCCTACTTC
CAAATCAGAAGTCTTTTCGACTGCTGCTGATGGACAGACAAGTGTTGAGATCAATGTGCTGCAGGGTGAGAGGGAGTTTGTCCGGG
ATAACAAGTCTCTTGGCAGCTTCCGTCTGGATGGTATTCCTCCGGCACCACGTGGAGTTCCACAAATCGAAGTCAAATTTGACATT
GATGCAAACGGAATCCTCTCAGTCAGTGCTAGTGACAAAGGCACCGGAAAGAAACAAGACATTACTATTACTGGTGCCAGTACATT
GCCCAAGGATGAGGTAGAGCAAATGGTGCAAGAAGCAGAAAGGTTTGCGAAAGATGACAAAGAGAAGAGGGATGCAATTGACACAA
AGAACCAGGCGGATTCAGTTGTTTACCAGACAGAGAAGCAACTTAAAGAACTTGGAGAGAAGATTCCAGGTGAAGTGAAAGAGAAG
GTGGAGGCCAAACTACAAGAGCTTAAAGAGAAGATTGGAAGCGGATCAACCCAAGAAATCAAGGACACCATGGCTGCTCTTAACCA
AGAAGTGATGCAGATTGGTCAATCTATGTACAACCAGCCTGGTGCTGGAGCAGGAGCTGCAGGTCCTTCCCCTGGAGGAGAAGGTG
CTTCATCAGCAGATTCATCGTCAAGCAAAGGTGGTGATGATGTGATCGATGCTGACTTCACTGATAGCAACTGAGGAATCGAACTT
TGATAATTGAGATGATGTGGATCGATACTGACTCACCTCCAATTAGAAAAAAAACTTGGATGCAGGGCGAAGCTATTTTATAAACA
ATGTGTTAGCAATTGCATCTACAATATTTTGAAAGTTTAGTGTATTGTATAATTATTTGTTTTATGTGCAAGTATGCACTTATAAA
TCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869727 cphsc70-1 [Arabidopsis lyrata subsp. lyrata] | 1337 | 2e-145 |
| NP_194159 chloroplast heat shock protein 70-1 [Arabidopsis thaliana] | 1332 | 9e-145 |
| XP_002864020 cphsc70-2 [Arabidopsis lyrata subsp. lyrata] | 1261 | 2e-136 |
| NP_199802 heat shock protein 70-2 [Arabidopsis thaliana] | 1258 | 3e-136 |
| AAF27639 heat shock protein 70 [Arabidopsis thaliana] | 1254 | 1e-135 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q02028 Stromal 70 kDa heat shock-related protein, chloroplastic | 1184 | 6e-129 |
| Q08080 Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) | 1114 | 8e-121 |
| P22358 Chaperone protein dnaK2 | 896 | 1e-095 |
| Q8YW74 Chaperone protein dnaK2 | 890 | 7e-095 |
| Q7U3C4 Chaperone protein dnaK2 | 887 | 2e-094 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9STW6 Hsp 70-like protein | 1332 | 6e-145 |
| Q9LTX9 Heat shock protein 70 | 1258 | 2e-136 |
| Q9M637 Heat shock protein 70 | 1254 | 7e-136 |
| Q1SKX2 Chaperone DnaK | 1208 | 1e-130 |
| B9SKC7 Heat shock protein, putative | 1206 | 3e-130 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G24280.1 cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding | 1333 | 3e-147 |
| AT5G49910.1 CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2); ATP binding / unfolded protein binding | 1259 | 1e-138 |
| AT5G09590.1 MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | 728 | 4e-077 |
| AT4G37910.1 mtHsc70-1 (mitochondrial heat shock protein 70-1); ATP binding | 714 | 2e-075 |
| AT5G02490.1 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) | 602 | 2e-062 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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