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Information for unigene UN11873
| FASTA Sequence |
| Unigene ID: UN11873 | Length: 908 |
SSR | | GGTGAAAGAGGGAGAGATAGAAGAGCACAAGACCGAAACCCTCACTGGCGATGGCTCTTTTCACCACGCGGCGCAAATTAGCGACA
GTCCTAACCAGAACACTCTCTTCGTCGTCGTCGTCGTTTTCTACGCTCTCTTCTCGTTCTCGATTCGCTGTGCATCTAATCGACAA
GGTTTCCTCGACCAGAACCGGACTGGGCCCGTGTTACATAACGACCCGACCCAAGACATCCGGGTCAGGATACTCTCCGCTGAACG
ATCCTTCGCCGAACTGGAGCAACCGCCCGCCGAAGGAGACGATTCTTCTCGATGGGTGCGATTACGAGCACTGGCTCATCGTCATG
GAGTTCGATGATCCCAAACCTACAGAAGATGAGATGATCAATGCTTATGTCAAAACCTTAACTTCTGTTGTCGGAAGCGAGGAGGA
GGCAAAGAAGAAGATCTACTCTGTTTCCACTTCGACTTACACTGGCTTTGGTGCTTTGATCTCTGAAGAGCTCTCTTGCAAAGTCA
AAGGATTGCCTGGTGTTCTTTGGGTCCTACCAGATTCTTATCTTGATGTACCCAACAAAGACTATGGAGGTGACTTGTACATTGAA
GGAAAGGTGATACCCAGACCACAGTACAGGTTCACTGACCAGCGCCAGACCAGAAACCGGTCTAGGCCTCGGTACGATAGGCGCCG
TGAGACTATGCAGTGGAGAGGAGAGAGCCACACAAAAGAACTGGAATCAAAATCAACCACCATCATCCATGGGTCATCAAGCTCCG
GAGAATTAGACAAAGCGCAGTAGTGCCTAAATAAAATATAAACCCTAGTTCCTTGTATTTTTACATGAACAAGTATGCATCTGTAA
TTGATCTTATTAGGCGTATGAGTTATTACATGTCCCCCTTAAACTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_974243 putative protein DAG [Arabidopsis thaliana] | 1002 | 1e-106 |
| NP_187335 putative protein DAG [Arabidopsis thaliana] | 997 | 5e-106 |
| XP_002884610 hypothetical protein ARALYDRAFT_477997 [Arabidopsis lyrata subsp. lyrata] | 983 | 2e-104 |
| XP_002272388 PREDICTED: hypothetical protein [Vitis vinifera] | 834 | 4e-087 |
| XP_002516969 DAG protein, chloroplast precursor, putative [Ricinus communis] | 819 | 2e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LKA5 Uncharacterized protein At3g15000, mitochondrial | 505 | 3e-050 |
| Q38732 DAG protein, chloroplastic | 421 | 1e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84JZ6 Putative DAG protein | 1002 | 9e-107 |
| Q9M7Y5 DAG protein, putative | 997 | 4e-106 |
| A5AMS0 Putative uncharacterized protein | 834 | 3e-087 |
| B9RTA0 DAG protein, chloroplast, putative | 819 | 2e-085 |
| B9HXF5 Predicted protein | 798 | 4e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06790.2 plastid developmental protein DAG, putative | 1002 | 5e-109 |
| AT3G06790.1 plastid developmental protein DAG, putative | 997 | 2e-108 |
| AT3G15000.1 LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 50779 Blast hits to 24732 proteins in 941 species: Archae - 10; Bacteria - 4862; Metazoa - 25623; Fungi - 7071; Plants - 6957; Viruses - 900; Other Eukaryotes - 5356 (source: NCBI BLink). | 505 | 2e-051 |
| AT1G11430.1 plastid developmental protein DAG, putative | 422 | 1e-041 |
| AT1G32580.1 plastid developmental protein DAG, putative | 408 | 4e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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