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Information for unigene UN11900
| FASTA Sequence |
| Unigene ID: UN11900 | Length: 899 |
| SNP | GGACGTAGCGCACGCGCAACGTGGAAGAGTTTGAAGATCCGGTACTGAAGAAAAACTTTCTCGGAAAATTCTATCTTTCTCGGAGG
GAAGAAGATCGGTGTTTTCCATATCGGAGAGGTCTTTCGTTTTCTCTGCTGATCAGCTTCGGATTGAATACATCCCAAGATGGATC
CTAGCCAGGCACCAGTTGAAAACTATGCGAACCCAAATACATGTCTCTTCCATGTTCTCTTCAAGGGTGCTGCGCTGGCGTTTTAC
ATTCTATCCGCTCTCTTCTTCAACAGCTTTGTCATCATCTTTGTCGTGACTGTTCTTCTTGCTGCCCTTGACTTCTGGGTGGTTAA
GAATGTGAGTGGCCGTATACTGGTTGGTCTCAGGTGGTGGAATGAGATCAATGACTTGGGAGAAAGTGTCTGGAAATTTGAGTCTC
TTGACCAGGAGTCCTTGGCTCGGATGAACAAGAAAGACTCGTGGCTTTTCTGGTGGACGCTTTACCTTGCAGCAGCTGCGTGGTTG
ATCCTTGGGGCATTTTCACTGATAAGGTTTCAGGCCGACTACCTGCTGGTTGTCGGCGTTTGCTTGTCCCTCAACGTGGCTAATAT
CATCGGCTTCACAAAGTGCAAGAAAGATGCAAAGAAACAGTTTCAGCAGTTTGCCTCACAGACAATCGCATCAAGGTTCCAGTCCA
CGGTACAATCTGCCTTCACACTTGTTTGAGAATAAAAAATGTTTTAGTGAGAGCAAAGACAGTGTACAAAGAAGATTGTCGCCATA
AGCAACACCATGTTTTTTTTGACTGATTGTTTTTCTCCACTATATATTAAGGGATTAAGGGATTTGAGAAAGAGGCTTATCATATT
CGTCTTTTTGACATGTATATTACATTTTCGACTTACCCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563842 uncharacterized protein [Arabidopsis thaliana] | 917 | 1e-096 |
| XP_002330023 predicted protein [Populus trichocarpa] | 859 | 5e-090 |
| XP_002318938 predicted protein [Populus trichocarpa] | 855 | 1e-089 |
| XP_002512539 Protein FAM18B, putative [Ricinus communis] | 840 | 8e-088 |
| ACU16785 unknown [Glycine max] | 815 | 6e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LEK2 Uncharacterized FAM18-like protein At1g09330 | 917 | 4e-098 |
| Q8IQC1 Uncharacterized FAM18-like protein CG5021 | 360 | 2e-033 |
| Q9Y7K7 Golgi apparatus membrane protein tvp23 | 328 | 9e-030 |
| Q6C7V5 Golgi apparatus membrane protein TVP23 | 324 | 2e-029 |
| Q86I95 Uncharacterized FAM18-like protein 1 | 321 | 6e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WRM9 Putative uncharacterized protein At1g09330 | 917 | 7e-097 |
| B9N466 Predicted protein | 859 | 3e-090 |
| A9PJZ6 Putative uncharacterized protein | 855 | 1e-089 |
| B9I6P4 Predicted protein | 855 | 1e-089 |
| B9RFM0 Protein FAM18B, putative | 840 | 6e-088 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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