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Information for unigene UN11950

FASTA Sequence
Unigene ID: UN11950Length: 1299 SSR 
GGGTATTGTACTCTTTTATATTTCGAAGAGAGAGAGAGAGAGAAGACGGAGAGAGCTGGAATCGTTTTTAATCGGAGATCATCCTC
GTGTGTGTTTGAGCTAGCTTCTCCTGTTTGACCGGACTCGCGGATCTGATTTAGCTCCGGCTCGTCTCTCGGTAGCTACAGAGTGA
CAGAGAGTTCATAACAAGGGTTTGTTTAATGGAAGACGATGGCTCTCGCGATGTGGATACACAGAGCCCTTATGATCGTTTGCTTG
CTCTAAATCCAACTTCCGTTGATTCTTCACATTGTAACTTGGGTTCGGTTTATCTAGCGATGAAGACCTCTTCGAAGCTGGAGTGC
GTCGATGAGCGTGGCCAAGATGCCCTTATTACCTCCGTATGCAACATGGAGGATGATGAGGAGAATGATGAAGAGTTCGATGAGTT
TGATCCTTACCTCTTCATCAAGAACCTGCCCCACTTGTCCTCTGTTGTCCCTACTTTCAGACCCCTCTTACTTCCTAAACAGACCC
GAAGCTGCCCTCCTATCTCCCTAGTCCTAGACCTCGACGAAACGCTTGTGCACTCTAGTCTAGAACCGTGTGGTGACGTGGATTTC
ACATTCCCTGTACATTTCAATGAAGAAGAGCATATGGTGTATGTGCGGTGCCGTCCTCACTTGAAAGAGTTCATGGAGAGAGTGTC
TCGTCTCTTTGAGGTCATTATATTTACTGCTAGCCAAAGTATCTATGCCGAGCAGCTTCTGAACGTGCTTGACCGTAAGAGGAAGT
TCTTTCGCCATAGAGTGTACCGTGACTCGTGTGTTTTCTTTGACGGTAACTACCTAAAGGATTTGTCAGTCTTCGGGCGTGATTTG
TCTCGTGTTATCATCGTCGATAACTCCCCACAGGCATTTGGGTTCCAAGTGGAGAATGGGGTGCCAATAGAGAGCTGGTTTGATGA
CCCCTCAGATAAAGAACTCCTACACTTGTTGCCGCTTCTAGAAAGCTTAGTAGGAGCAGAAGATGTAAGGCCGATGATCGCCAAGA
AATTCAATCTAAAGGAAAAGATTGATGCAGCTGTAGCTGCACCTGAGTATCCTGCTGAGGCTGGAGATCCTTTCGAAAGGTAAAAG
GATCATAAGAGGAGAAGACTTGCTCTCTGGGAGGATGGATGCTTTGAAAAGCTTAGTGGAAGTTTTTCTTCCTATTATTGAGTCTT
GAGGGATCACAAGTTGGAAGATATATATTTATATATATCTCAAATGTTGTTTTCTTATTAGTTTAAAGAACTTGGTATACAAAGAA
TAGCCTGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196747 SCP1-like small phosphatase 5 [Arabidopsis thaliana]13615e-148
XP_002873535 NLI interacting factor family protein [Arabidopsis lyrata subsp. lyrata]13615e-148
XP_002271611 PREDICTED: hypothetical protein [Vitis vinifera]10873e-116
CBI27650 unnamed protein product [Vitis vinifera]10873e-116
XP_002514919 conserved hypothetical protein [Ricinus communis]10363e-110

Swiss-Prot top hits (Blast detail)Scoree value
Q54GB2 CTD small phosphatase-like protein 26775e-070
Q08BB5 CTD small phosphatase-like protein 2-A6131e-062
Q801R4 CTD small phosphatase-like protein 2-A6122e-062
A4QNX6 CTD small phosphatase-like protein 2-B6122e-062
Q66KM5 CTD small phosphatase-like protein 26122e-062

TrEMBL top hits (Blast detail)Scoree value
Q9LYI7 At5g1186013614e-148
B9RMF0 Putative uncharacterized protein10362e-110
B9GMJ1 Predicted protein (Fragment)10334e-110
B9GZZ4 Predicted protein9861e-104
A2YJB8 Putative uncharacterized protein9752e-103

Arabidopsis top hits (Blast detail)Scoree value
AT5G11860.1 NLI interacting factor (NIF) family protein13622e-150
AT5G11860.2 NLI interacting factor (NIF) family protein13622e-150
AT5G11860.3 NLI interacting factor (NIF) family protein13622e-150
AT5G11860.4 NLI interacting factor (NIF) family protein13622e-150
AT5G46410.1 NLI interacting factor (NIF) family protein6157e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information