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Information for unigene UN11959
| FASTA Sequence |
| Unigene ID: UN11959 | Length: 1241 |
SSR | | GGAATCTCTCACACTTTAGACCTAAACACCTAATTAAAGCCCCCCCAAATCGCTTCATATGGCAGAGTGTCTGTCTCTCACACTCA
ACAACAACACCATGGCTTCCTCTCTTCGATCTCAAATCTCCGCTTCTCTTCTCCTCCGCTTCTCCTCCTCCTCCTCCGGATCCAAA
CTCTCTTTCCCCTCGTCATCTCTCTCCTTCACCAGATCTCTCGTCTCTTCTCCGCTTCTCTCTCAGAAGAGAAGTCAAGCTACGTT
GGTGATTCGGAGGAGCTTCAGCTCGGCTGCAACCACCCAATGTACGGCAGCTACGGATCCTGAACAGTTGAAGAGTGCTAGAGAAG
ACATCAAAAAGCTCCTCAACACCAAGTTTTGCCATCCAATCTTGGTTCGTTTGGGGTGGCATGATGCTGGTACCTACAACAAGAAC
ATCTCTGAGTGGCCTCAGAGAGGTGGAGCTAATGGCAGTCTCAGATACGAGATTGAGCTTAAGCATGCTGCTAATGCTGGTCTTGT
AAATGCTTTAAACCTTATTCAGCACATCAAAGACATGTACTCTGGGATCTCGTACGCTGACCTTTTCCAGCTGGCCAGTGCTACTG
CTATAGAGGAAGCTGGAGGACCTAAAATACCCATGAAATATGGAAGAGTTGATACCTCTGGTCCTCATGAATGTCCTGAAGAAGGA
AGGCTTCCTGACGCTGGTCCTCCTTCACCTGCTAATCATTTCAGAGAAGTTTTTTACAGAATGGGTTTAGATGATAAGGACATAGT
TGCATTATTTGGTGCACACACCTTAGGAAGATTTAGGCCAGAACGTAGTGGTTGGGGGAAGCCAGAAACGAAGTACACGAAAGAAG
GACCGGGAGCACCAGGAGGACAGTCATGGACACCAGAGTGGTTGAAGTTTGACAATTCTTACTTCACAGAAATCAAGGAAAAGAGA
GATGGAGATCTCCTTGTCCTGCCCACTGATGCTGCCATCTTTGAAGATCCTTCTTTCAAGGTGTATGCTGAGAAGTATGCTGCAGA
TCAAGATGCTTTTTTCAAGGATTATGCTGAATCCCATGCGAAACTGAGCAATCTTGGAGCAAAATTTAACCCTCCTGAGGGTATCA
TTATCTAGTCGGCATTTAATTAACTCTGTCGAGATATCTTTTGGACAATGTTTTTGCACAAAGGAGTTGGTTGAGTTTCCTTTGCC
TTAACTATTGGTCGTTCGTGTCATGGTTGAATTGTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAD14932 stromal ascorbate peroxidase [Brassica oleracea] | 1685 | 1e-185 |
| XP_002872395 hypothetical protein ARALYDRAFT_489749 [Arabidopsis lyrata subsp. lyrata] | 1471 | 9e-161 |
| NP_001078356 L-ascorbate peroxidase [Arabidopsis thaliana] | 1468 | 2e-160 |
| NP_192579 L-ascorbate peroxidase [Arabidopsis thaliana] | 1467 | 3e-160 |
| CAA67425 stromal ascorbate peroxidase [Arabidopsis thaliana] | 1467 | 3e-160 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42592 L-ascorbate peroxidase S, chloroplastic/mitochondrial | 1467 | 1e-161 |
| Q42593 L-ascorbate peroxidase T, chloroplastic | 1232 | 2e-134 |
| Q7XJ02 Probable L-ascorbate peroxidase 7, chloroplastic | 1222 | 3e-133 |
| Q69SV0 Probable L-ascorbate peroxidase 8, chloroplastic | 1206 | 2e-131 |
| P0C0L1 Probable L-ascorbate peroxidase 6, chloroplastic | 1191 | 1e-129 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q75UU8 Stromal ascorbate peroxidase | 1685 | 1e-185 |
| A8MSA4 Uncharacterized protein At4g08390.3 | 1459 | 2e-159 |
| D2D312 Stromal ascorbate peroxidase | 1365 | 1e-148 |
| C6ZDB0 Chloroplast stromal ascorbate peroxidase | 1362 | 3e-148 |
| B9S2Y4 Cytochrome c peroxidase, mitochondrial, putative | 1331 | 1e-144 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G08390.1 SAPX (STROMAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | 1468 | 8e-163 |
| AT4G08390.2 SAPX (STROMAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | 1468 | 8e-163 |
| AT4G08390.3 SAPX (STROMAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | 1460 | 6e-162 |
| AT1G77490.1 TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | 1232 | 2e-135 |
| AT4G35000.1 APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase | 415 | 1e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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