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Information for unigene UN11961
| FASTA Sequence |
| Unigene ID: UN11961 | Length: 1349 |
SSR | | AAAAAGAACATGGTGGAGTCGTCCGTTTTTAAGAAGACCAACTTCTCTCCGTCTTCACAAGACATAAGAACAAGAACAAAGCCCCC
TTATTGACTCACCATACTTCTTAGAATCAGGAAAAGTGAAGAAGCGAAAGAGAGAAGAAGAAGAAAGTCGGATGGGAGTGGATTAC
TACAACGTCCTCCAAGTCGATCGCAACGCCTCAGACGATGATCTTAAGAAAGCTTACAGAAAACTCGCCATGAAATGGCATCCCGA
CAAGAACCCCAACAACAAAAAGGACGCGGAAGCCAAGTTCAAGCAGATCTCCGAAGCTTACGAGGTTCTTAGTGATCCCCAGAAGA
AAGCTGTGTACGATCAGTATGGCGAGGAAGGCTTGAAAGGGAACGTCCCTCCTCCAGATGCTGGTGGAGCCACTTACTTCTCTACC
GGAGACGGTCCAACTTCCTTCCGGTTCAACCCGAGAAGCGCAGACGATGTATTTGCCGAGTTCTTTGGGTTCTCCGGGCCGTTTGG
TGGTGGTGGCGGTGGTGGTACAAGATTCTCTAGAAGCATGTTTGGAGATAACATCTTTGCCTCTTTCGGTGAAGGAGGAGGAGGAG
GAGGAGCTATGCATCATAGTGTACCCAAGAAGGCGCCTCCTATCGAAAACAAGCTGCCTTGTAGCCTTGAAGATCTCTACAAAGGT
ACCACCAATAAGATGAAGATCTCTAGAGAGATCGCTGATGTCAGCGGGAAGACGATGCCTGTGGAAGAGATTTTAACGATTGATGT
GAAGCCAGGGTGGAAGAAAGGCACAAGAATCACATTCCCTGAGAAAGGAAACGAGCAACCCGGTGTCACTCCAGCTGATTTAGTCT
TCATCATCGACGAGAAGCCTCACCCGGTCTTCACTCGGGAGGGCAATGATTTCGTAGTCACACAGAAGGTCTCGCTTGTTGAGGCC
TTGACAGGCTGCACTGTGAACCTGATAACACTTGATGGCCGGAGACTAACAATCCCAGTCACCAGTGTGATCCACCCCGAGTACGA
GGAAGTGATTCCAAAGGAAGGAATGCCCTTGCAGAAAGATCAGACAAAGAGAGGAAACTTGAGGATCAAGTTCAACATCAAGTTCC
CCACGAGATTAACCTTAGAGCAGAAGACAGGAGTGAAGAAGCTTTTCGGATAAATTGAACTATAATCACTACGTACCAGTCAAAGC
AATGTACAACAAGTCAACAACAGAGGAGGAGGAAGATTTAAGCTTCTGTCTTGTGTCGATCAGAGAGATTGTGATTATTACTGTTG
TATCCTTTTTGGTCGATCTGTAATAAAATACTCGTAATAAAATTTGTTTGCTGTAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002886287 DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] | 1621 | 4e-178 |
| NP_179646 DNAJ heat shock protein-like protein [Arabidopsis thaliana] | 1617 | 1e-177 |
| XP_002869499 DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] | 1513 | 1e-165 |
| NP_194577 DNAJ heat shock protein [Arabidopsis thaliana] | 1504 | 2e-164 |
| XP_002517853 Protein SIS1, putative [Ricinus communis] | 1426 | 2e-155 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9D832 DnaJ homolog subfamily B member 4 | 674 | 1e-069 |
| Q9UDY4 DnaJ homolog subfamily B member 4 | 670 | 3e-069 |
| Q5R8J8 DnaJ homolog subfamily B member 4 | 670 | 3e-069 |
| Q2KIT4 DnaJ homolog subfamily B member 4 | 655 | 2e-067 |
| Q9QYJ3 DnaJ homolog subfamily B member 1 | 645 | 3e-066 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SIL3 At2g20560/T13C7.15 | 1617 | 8e-178 |
| O49457 Heat-shock protein | 1504 | 1e-164 |
| B9RVT4 Protein SIS1, putative | 1426 | 1e-155 |
| C6T8E0 Putative uncharacterized protein | 1415 | 2e-154 |
| B7FHS3 Putative uncharacterized protein | 1402 | 7e-153 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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